Description : LAS1 pre-rRNA cleavage factor involved in ITS2 rRNA removal
Gene families : OG_42_0006441 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006441_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Marchantia polymorpha: Mp5g04770.1 | |
Cluster | HCAA Clusters: Cluster_67 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.C00510.1 | No alias | LAS1 pre-rRNA cleavage factor involved in ITS2 rRNA removal | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004519 | endonuclease activity | IEA | 16Dec |
BP | GO:0006364 | rRNA processing | IEA | 16Dec |
CC | GO:0090730 | Las1 complex | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
BP | GO:0006457 | protein folding | IEP | Predicted GO |
BP | GO:0007034 | vacuolar transport | IEP | Predicted GO |
MF | GO:0017056 | structural constituent of nuclear pore | IEP | Predicted GO |
MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
BP | GO:0048193 | Golgi vesicle transport | IEP | Predicted GO |
MF | GO:0050662 | coenzyme binding | IEP | Predicted GO |
MF | GO:0051082 | unfolded protein binding | IEP | Predicted GO |
MF | GO:0070403 | NAD+ binding | IEP | Predicted GO |
MF | GO:0070569 | uridylyltransferase activity | IEP | Predicted GO |
MF | GO:1901681 | sulfur compound binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007174 | Las1 | 10 | 160 |
No external refs found! |