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At5g14230


Description : CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25 /.../oteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink). [Source:TAIR;Acc:AT5G14230]


Gene families : OG_42_0001604 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001604_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g14230
Cluster HCCA clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Kfl00538_0020 kfl00538_0020_v1.1 (at5g14230 : 285.0) CONTAINS InterPro DOMAIN/s: Ankyrin... 0.02 Orthogroups_2024-Update
PSME_00043239-RA No alias (at5g14230 : 514.0) CONTAINS InterPro DOMAIN/s: Ankyrin... 0.02 Orthogroups_2024-Update
PSME_00044629-RA No alias (at5g14230 : 484.0) CONTAINS InterPro DOMAIN/s: Ankyrin... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 303 331
IPR020683 Ankyrin_rpt-contain_dom 444 506
IPR020683 Ankyrin_rpt-contain_dom 521 609
IPR020683 Ankyrin_rpt-contain_dom 84 161
No external refs found!