Mp5g14190.1

Description : component PsbW of PS-II complex

Gene families : OG_42_0003970 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003970_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha: Mp5g14190.1
Cluster	HCAA Clusters: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method
A4A49_05181	No alias	photosystem ii reaction center w protein, chloroplastic	0.1	Orthogroups_2024-Update
A4A49_19163	No alias	photosystem ii reaction center w protein, chloroplastic	0.06	Orthogroups_2024-Update
Bradi2g20380	No alias	photosystem II reaction center W	0.04	Orthogroups_2024-Update
Bradi2g51480	No alias	photosystem II reaction center W	0.02	Orthogroups_2024-Update
Brara.D01828.1	No alias	component *(PsbW) of PS-II complex	0.12	Orthogroups_2024-Update
Brara.E01277.1	No alias	component *(PsbW) of PS-II complex	0.04	Orthogroups_2024-Update
Glyma.02G141700	No alias	photosystem II reaction center W	0.16	Orthogroups_2024-Update
Glyma.03G159100	No alias	photosystem II reaction center W	0.09	Orthogroups_2024-Update
Glyma.10G032200	No alias	photosystem II reaction center W	0.09	Orthogroups_2024-Update
Glyma.19G161400	No alias	photosystem II reaction center W	0.07	Orthogroups_2024-Update
HORVU1Hr1G078140.4	No alias	component *(PsbW) of PS-II complex	0.03	Orthogroups_2024-Update
HORVU3Hr1G075870.1	No alias	component *(PsbW) of PS-II complex	0.03	Orthogroups_2024-Update
Kfl00638_0030	kfl00638_0030_v1.1	no hits & (original description: no original description)	0.07	Orthogroups_2024-Update
LOC_Os01g56680	No alias	photosystem II reaction center W protein, chloroplast...	0.03	Orthogroups_2024-Update
LOC_Os05g43310	No alias	photosystem II reaction center W protein, chloroplast...	0.03	Orthogroups_2024-Update
PSME_00010732-RA	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
Pp1s185_110V6	No alias	photosystem ii reaction center w chloroplast	0.17	Orthogroups_2024-Update
Pp1s185_111V6	No alias	photosystem ii reaction center w chloroplast	0.07	Orthogroups_2024-Update
Seita.3G184900.1	No alias	component *(PsbW) of PS-II complex	0.07	Orthogroups_2024-Update
Seita.5G336700.1	No alias	component *(PsbW) of PS-II complex	0.11	Orthogroups_2024-Update
Sobic.003G313000.1	No alias	component *(PsbW) of PS-II complex	0.09	Orthogroups_2024-Update
Sobic.009G191300.1	No alias	component *(PsbW) of PS-II complex	0.04	Orthogroups_2024-Update
Solyc06g084050	No alias	LOW QUALITY:isochorismate synthase 2 (AHRD V3.3 --* AT1G18870.2)	0.03	Orthogroups_2024-Update
Solyc09g065910	No alias	photosystem II reaction center W (AHRD V3.3 *** AT2G30570.1)	0.07	Orthogroups_2024-Update
Sopen06g035440	No alias	Photosystem II reaction centre W protein (PsbW)	0.08	Orthogroups_2024-Update
Sopen09g027700	No alias	Photosystem II reaction centre W protein (PsbW)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009507	chloroplast	IEA	16Dec
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	16Dec
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	16Dec
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044436	thylakoid part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004089	carbonate dehydratase activity	IEP	Predicted GO
MF	GO:0004133	glycogen debranching enzyme activity	IEP	Predicted GO
MF	GO:0004134	4-alpha-glucanotransferase activity	IEP	Predicted GO
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Predicted GO
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Predicted GO
MF	GO:0008171	O-methyltransferase activity	IEP	Predicted GO
BP	GO:0008272	sulfate transport	IEP	Predicted GO
BP	GO:0009308	amine metabolic process	IEP	Predicted GO
CC	GO:0009522	photosystem I	IEP	Predicted GO
CC	GO:0009538	photosystem I reaction center	IEP	Predicted GO
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Predicted GO
BP	GO:0009690	cytokinin metabolic process	IEP	Predicted GO
MF	GO:0009916	alternative oxidase activity	IEP	Predicted GO
BP	GO:0010817	regulation of hormone levels	IEP	Predicted GO
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Predicted GO
BP	GO:0016311	dephosphorylation	IEP	Predicted GO
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Predicted GO
MF	GO:0016791	phosphatase activity	IEP	Predicted GO
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Predicted GO
CC	GO:0019898	extrinsic component of membrane	IEP	Predicted GO
MF	GO:0030151	molybdenum ion binding	IEP	Predicted GO
BP	GO:0034754	cellular hormone metabolic process	IEP	Predicted GO
BP	GO:0042445	hormone metabolic process	IEP	Predicted GO
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Predicted GO
BP	GO:0072348	sulfur compound transport	IEP	Predicted GO
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Predicted GO
CC	GO:1902494	catalytic complex	IEP	Predicted GO
CC	GO:1990204	oxidoreductase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR009806	PSII_PsbW_class2	1	134

External Links

No external refs found!

Mp5g14190.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation