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Description : F-box/LRR-repeat protein At4g29420 OS=Arabidopsis thaliana (sp|q9m0e1|fbl77_arath : 94.0)
Gene families : OG_42_0005033 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005033_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Marchantia polymorpha: Mp5g16780.1 | |
| Cluster | HCAA Clusters: Cluster_89 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| MA_70943g0010 | No alias | (at4g29420 : 222.0) F-box/RNI-like superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| Pp1s33_76V6 | No alias | F17A13.240; F-box family protein [Arabidopsis thaliana] | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Predicted GO |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Predicted GO |
| MF | GO:0003677 | DNA binding | IEP | Predicted GO |
| MF | GO:0003684 | damaged DNA binding | IEP | Predicted GO |
| MF | GO:0004386 | helicase activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| MF | GO:0005515 | protein binding | IEP | Predicted GO |
| CC | GO:0005737 | cytoplasm | IEP | Predicted GO |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006281 | DNA repair | IEP | Predicted GO |
| BP | GO:0006401 | RNA catabolic process | IEP | Predicted GO |
| BP | GO:0006402 | mRNA catabolic process | IEP | Predicted GO |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predicted GO |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Predicted GO |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Predicted GO |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Predicted GO |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predicted GO |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Predicted GO |
| BP | GO:0033554 | cellular response to stress | IEP | Predicted GO |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Predicted GO |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Predicted GO |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Predicted GO |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Predicted GO |
| BP | GO:0048519 | negative regulation of biological process | IEP | Predicted GO |
| BP | GO:0051716 | cellular response to stimulus | IEP | Predicted GO |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |