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  5. At5g15250

At5g15250


Description : ATP-dependent zinc metalloprotease FTSH 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q1PDW5]


Gene families : OG_42_0001288 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001288_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g15250
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
139726 No alias FtsH extracellular protease family 0.02 Orthogroups_2024-Update
Brara.H02960.1 No alias protease *(FtsH2/8) & EXECUTER-cleavage protease... 0.04 Orthogroups_2024-Update
Brara.J00441.1 No alias protease *(FtsH2/8) & EXECUTER-cleavage protease... 0.04 Orthogroups_2024-Update
Mp4g19200.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.02 Orthogroups_2024-Update
Potri.017G084000 No alias FTSH protease 6 0.04 Orthogroups_2024-Update
Pp1s118_166V6 No alias aaa-metalloprotease chloroplast precursor 0.03 Orthogroups_2024-Update
Pp1s9_115V6 No alias cell division protein 0.02 Orthogroups_2024-Update
Sopen07g026900 No alias Peptidase family M41 0.04 Orthogroups_2024-Update
evm.model.tig00021127.121 No alias (at5g42270 : 463.0) VAR1 contains a conserved motif for... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006508 proteolysis IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008146 sulfotransferase activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR011546 Pept_M41_FtsH_extracell 90 160
IPR000642 Peptidase_M41 473 663
IPR003959 ATPase_AAA_core 260 392
No external refs found!