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  5. Mp5g23620.1

Mp5g23620.1


Description : component TRA1 of SAGA transcription co-activator complex. protein kinase (PIKK)


Gene families : OG_42_0004014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp5g23620.1
Cluster HCAA Clusters: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
98463 No alias Phosphatidylinositol 3- and 4-kinase family protein with... 0.05 Orthogroups_2024-Update
At2g17930 No alias Phosphatidylinositol 3-and 4-kinase family protein with... 0.03 Orthogroups_2024-Update
Bradi1g19650 No alias Phosphatidylinositol 3- and 4-kinase family protein with... 0.09 Orthogroups_2024-Update
Cre02.g088750 No alias phosphotransferases, alcohol group as... 0.03 Orthogroups_2024-Update
Glyma.01G166400 No alias Phosphatidylinositol 3- and 4-kinase family protein with... 0.02 Orthogroups_2024-Update
Glyma.11G077000 No alias Phosphatidylinositol 3- and 4-kinase family protein with... 0.06 Orthogroups_2024-Update
HORVU2Hr1G025140.16 No alias component *(TRA1) of SAGA transcription co-activator... 0.02 Orthogroups_2024-Update
Kfl00192_0160 kfl00192_0160_v1.1 (at4g36080 : 4007.0) phosphotransferases, alcohol group... 0.04 Orthogroups_2024-Update
MA_10427352g0010 No alias (at2g17930 : 666.0) Phosphatidylinositol 3- and 4-kinase... 0.04 Orthogroups_2024-Update
PSME_00005546-RA No alias (at2g17930 : 4469.0) Phosphatidylinositol 3- and... 0.02 Orthogroups_2024-Update
Potri.005G114300 No alias Phosphatidylinositol 3- and 4-kinase family protein with... 0.03 Orthogroups_2024-Update
Seita.2G412100.1 No alias component *(TRA1) of SAGA transcription co-activator... 0.02 Orthogroups_2024-Update
Sobic.002G396500.1 No alias SAGA complex assembly platform component *(TRA1) &... 0.04 Orthogroups_2024-Update
evm.model.tig00021537.67 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
evm.model.tig00021537.68 No alias (at2g17930 : 373.0) Phosphatidylinositol 3- and 4-kinase... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000403 PI3/4_kinase_cat_dom 3644 3890
IPR003151 PIK-rel_kinase_FAT 2872 3220
No external refs found!