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  5. Solyc03g114680

Solyc03g114680


Description : RING/U-box superfamily protein (AHRD V3.3 *-* AT5G08139.1)


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g114680
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
At5g01980 No alias At5g01980 [Source:UniProtKB/TrEMBL;Acc:Q9LZN3] 0.03 Orthogroups_2024-Update
Brara.E02211.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Cre10.g422050 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G002870.3 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os12g04590 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
Mp7g04520.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Potri.001G322600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G029300 No alias RING-H2 finger C1A 0.02 Orthogroups_2024-Update
Potri.019G086500 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Seita.2G061300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G055501.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G165900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc10g045180 No alias E3 ubiquitin-protein ligase (AHRD V3.3 --* A0A0F7G5V7_9ROSI) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 409 451
No external refs found!