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  5. Mp6g02250.1

Mp6g02250.1


Description : Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana (sp|q6aww5|y5262_arath : 95.9)


Gene families : OG_42_0005969 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005969_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp6g02250.1
Cluster HCAA Clusters: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
evm.model.tig00000076.62 No alias (at2g31820 : 90.5) Ankyrin repeat family protein;... 0.01 Orthogroups_2024-Update
evm.model.tig00000903.13 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
evm.model.tig00021013.41 No alias (at5g14230 : 108.0) CONTAINS InterPro DOMAIN/s: Ankyrin... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 235 263
IPR020683 Ankyrin_rpt-contain_dom 307 396
IPR020683 Ankyrin_rpt-contain_dom 408 496
IPR020683 Ankyrin_rpt-contain_dom 158 213
No external refs found!