At5g16600


Description : MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SPG7]


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g16600
Cluster HCCA clusters: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
At2g26950 No alias Transcription factor MYB104... 0.03 Orthogroups_2024-Update
At3g23250 No alias Transcription factor MYB15... 0.03 Orthogroups_2024-Update
At5g10280 No alias Transcription factor MYB92... 0.03 Orthogroups_2024-Update
At5g14750 No alias WER1 [Source:UniProtKB/TrEMBL;Acc:A0A178UJM1] 0.03 Orthogroups_2024-Update
At5g16770 No alias Myb domain protein 9 [Source:UniProtKB/TrEMBL;Acc:F4KE69] 0.03 Orthogroups_2024-Update
At5g49620 No alias myb domain protein 78 [Source:TAIR;Acc:AT5G49620] 0.03 Orthogroups_2024-Update
Bradi2g24400 No alias myb domain protein 6 0.02 Orthogroups_2024-Update
Bradi2g36730 No alias myb domain protein 61 0.02 Orthogroups_2024-Update
Bradi2g48521 No alias Duplicated homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g49970 No alias myb domain protein 19 0.02 Orthogroups_2024-Update
Bradi5g20130 No alias myb domain protein 63 0.02 Orthogroups_2024-Update
Brara.A02585.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.B00668.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.B01349.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.03 Orthogroups_2024-Update
Brara.G03210.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G013581 No alias myb domain protein 48 0.02 Orthogroups_2024-Update
GRMZM2G052606 No alias myb domain protein 46 0.02 Orthogroups_2024-Update
GRMZM2G064744 No alias myb domain protein 86 0.03 Orthogroups_2024-Update
GRMZM2G131442 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
GRMZM2G167829 No alias myb domain protein 87 0.04 Orthogroups_2024-Update
GRMZM2G425427 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
Glyma.08G168100 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Glyma.09G261600 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Glyma.10G191000 No alias myb domain protein 305 0.03 Orthogroups_2024-Update
Glyma.13G339900 No alias myb domain protein 83 0.02 Orthogroups_2024-Update
Glyma.15G066800 No alias MYB-like 102 0.04 Orthogroups_2024-Update
Glyma.15G259400 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Glyma.16G007200 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Glyma.19G222200 No alias myb domain protein 55 0.03 Orthogroups_2024-Update
Glyma.20G158100 No alias myb domain protein 17 0.02 Orthogroups_2024-Update
LOC_Os04g39470 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g43580 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g44090 No alias myb-related protein Hv33, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00020880-RA No alias (at1g66230 : 247.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00040054-RA No alias (at3g13890 : 229.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00052883-RA No alias (p20026|myb1_horvu : 239.0) Myb-related protein Hv1 -... 0.02 Orthogroups_2024-Update
Potri.008G173400 No alias myb domain protein 79 0.03 Orthogroups_2024-Update
Potri.011G125900 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Potri.012G084100 No alias myb domain protein 86 0.03 Orthogroups_2024-Update
Potri.017G086300 No alias myb domain protein 16 0.03 Orthogroups_2024-Update
Potri.019G018200 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Seita.1G077900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G087200.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.7G030000.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Solyc06g074910 No alias potato leaf 0.03 Orthogroups_2024-Update
Solyc11g011050 No alias R2R3MYB transcription factor 43 0.03 Orthogroups_2024-Update
Sopen02g033980 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen06g023610 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen11g005820 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 71 111
IPR001005 SANT/Myb 14 61
No external refs found!