1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At5g16640

At5g16640


Description : Pentatricopeptide repeat-containing protein At5g16640, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FMD3]


Gene families : OG_42_0000374 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g16640
Cluster HCCA clusters: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
At1g64100 No alias Pentatricopeptide (PPR) repeat-containing protein... 0.03 Orthogroups_2024-Update
Brara.I05097.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen06g002620 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 464 501
IPR002885 Pentatricopeptide_repeat 115 163
IPR002885 Pentatricopeptide_repeat 184 233
IPR002885 Pentatricopeptide_repeat 394 443
IPR002885 Pentatricopeptide_repeat 254 302
IPR002885 Pentatricopeptide_repeat 324 373
No external refs found!