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  5. Mp6g10670.1

Mp6g10670.1


Description : component RFC2 of PCNA sliding clamp loader complex


Gene families : OG_42_0006612 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006612_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp6g10670.1
Cluster HCAA Clusters: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Glyma.17G130800 No alias replication factor C 2 0.03 Orthogroups_2024-Update
PSME_00009817-RA No alias (at1g63160 : 516.0) replication factor C 2 (RFC2);... 0.06 Orthogroups_2024-Update
evm.model.tig00000042.30 No alias (at1g63160 : 390.0) replication factor C 2 (RFC2);... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 51 168
IPR013748 Rep_factorC_C 237 322
No external refs found!