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  5. Mp6g16430.1

Mp6g16430.1


Description : RING-HC-class E3 ligase. ligating E3 protein (RGLG)


Gene families : OG_42_0000469 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp6g16430.1
Cluster HCAA Clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
148275 No alias RING domain ligase2 0.02 Orthogroups_2024-Update
Bradi1g36250 No alias RING domain ligase1 0.02 Orthogroups_2024-Update
Glyma.08G234200 No alias Ca(2)-dependent phospholipid-binding protein (Copine) family 0.02 Orthogroups_2024-Update
Glyma.15G219300 No alias Ca(2)-dependent phospholipid-binding protein (Copine) family 0.04 Orthogroups_2024-Update
Glyma.18G013100 No alias Copine (Calcium-dependent phospholipid-binding protein) family 0.02 Orthogroups_2024-Update
Potri.008G183600 No alias RING domain ligase2 0.03 Orthogroups_2024-Update
Pp1s30_112V6 No alias rglg2 (ring domain ligase2) ubiquitin-protein ligase 0.02 Orthogroups_2024-Update
Pp1s49_225V6 No alias copine family protein 0.02 Orthogroups_2024-Update
Sobic.007G220100.1 No alias E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG) 0.02 Orthogroups_2024-Update
Sopen03g030990 No alias Copine 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0006879 cellular iron ion homeostasis IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055072 iron ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR010734 Copine 84 298
No external refs found!