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Description : tRNA cytidine-methyltransferase (TRM140)
Gene families : OG_42_0005502 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005502_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Marchantia polymorpha: Mp7g01200.1 | |
| Cluster | HCAA Clusters: Cluster_8 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Predicted GO |
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003729 | mRNA binding | IEP | Predicted GO |
| MF | GO:0003989 | acetyl-CoA carboxylase activity | IEP | Predicted GO |
| MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | Predicted GO |
| MF | GO:0004519 | endonuclease activity | IEP | Predicted GO |
| MF | GO:0004521 | endoribonuclease activity | IEP | Predicted GO |
| MF | GO:0004525 | ribonuclease III activity | IEP | Predicted GO |
| MF | GO:0004540 | ribonuclease activity | IEP | Predicted GO |
| CC | GO:0005849 | mRNA cleavage factor complex | IEP | Predicted GO |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Predicted GO |
| BP | GO:0006378 | mRNA polyadenylation | IEP | Predicted GO |
| BP | GO:0006396 | RNA processing | IEP | Predicted GO |
| BP | GO:0006400 | tRNA modification | IEP | Predicted GO |
| BP | GO:0006631 | fatty acid metabolic process | IEP | Predicted GO |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | Predicted GO |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
| CC | GO:0009317 | acetyl-CoA carboxylase complex | IEP | Predicted GO |
| BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
| MF | GO:0016421 | CoA carboxylase activity | IEP | Predicted GO |
| MF | GO:0016763 | transferase activity, transferring pentosyl groups | IEP | Predicted GO |
| MF | GO:0016885 | ligase activity, forming carbon-carbon bonds | IEP | Predicted GO |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0016987 | sigma factor activity | IEP | Predicted GO |
| BP | GO:0018208 | peptidyl-proline modification | IEP | Predicted GO |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Predicted GO |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Predicted GO |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Predicted GO |
| BP | GO:0043631 | RNA polyadenylation | IEP | Predicted GO |
| BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predicted GO |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR019410 | Methyltransf_16 | 383 | 546 |
| No external refs found! |