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  5. Solyc03g114910

Solyc03g114910


Description : Protein COBRA (AHRD V3.3 *** COBRA_ARATH)


Gene families : OG_42_0000486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000486_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g114910
Cluster HCCA clusters: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
Glyma.04G006100 No alias COBRA-like protein 2 precursor 0.02 Orthogroups_2024-Update
Glyma.06G005800 No alias COBRA-like protein 1 precursor 0.03 Orthogroups_2024-Update
Potri.004G219200 No alias COBRA-like protein 6 precursor 0.03 Orthogroups_2024-Update
Seita.7G184000.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA InterProScan predictions
BP GO:0016049 cell growth IEA InterProScan predictions
CC GO:0031225 anchored component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
BP GO:0006848 pyruvate transport IEP Predicted GO
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0015718 monocarboxylic acid transport IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:1901475 pyruvate transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR006918 COBRA_pln 61 224
No external refs found!