At5g18270

Description : NAC domain-containing protein 87 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK44]

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At5g18270
Cluster	HCCA clusters: Cluster_79

Target	Alias	Description	ECC score	Gene Family Method
A4A49_26375	No alias	protein sombrero	0.02	Orthogroups_2024-Update
At3g61910	No alias	NAC domain-containing protein 66...	0.03	Orthogroups_2024-Update
At4g10350	No alias	Protein BEARSKIN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV87]	0.03	Orthogroups_2024-Update
Bradi3g09520	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Brara.C03560.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.E01892.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I02350.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.04G078600	No alias	NAC domain containing protein 38	0.03	Orthogroups_2024-Update
Glyma.14G210000	No alias	NAC domain containing protein 28	0.03	Orthogroups_2024-Update
HORVU4Hr1G083050.5	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
HORVU5Hr1G087840.5	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os06g23650	No alias	no apical meristem protein, putative, expressed	0.03	Orthogroups_2024-Update
Pp1s288_4V6	No alias	no apical meristem	0.02	Orthogroups_2024-Update
Sobic.002G421400.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Solyc03g098190	No alias	NAC domain protein (AHRD V3.3 *** A0A0K9PDJ8_ZOSMR)	0.03	Orthogroups_2024-Update
Solyc10g005010	No alias	NAC domain-containing protein, putative (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Predicted GO
BP	GO:0005991	trehalose metabolic process	IEP	Predicted GO
BP	GO:0005992	trehalose biosynthetic process	IEP	Predicted GO
BP	GO:0006835	dicarboxylic acid transport	IEP	Predicted GO
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Predicted GO
BP	GO:0015711	organic anion transport	IEP	Predicted GO
BP	GO:0015740	C4-dicarboxylate transport	IEP	Predicted GO
BP	GO:0015743	malate transport	IEP	Predicted GO
BP	GO:0015849	organic acid transport	IEP	Predicted GO
BP	GO:0016311	dephosphorylation	IEP	Predicted GO
BP	GO:0046351	disaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0046942	carboxylic acid transport	IEP	Predicted GO
MF	GO:0051087	chaperone binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	22	147

External Links

No external refs found!

At5g18270

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation