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  5. Mp7g05530.1

Mp7g05530.1


Description : component LHCb1/2/3 of LHC-II complex


Gene families : OG_42_0000070 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp7g05530.1
Cluster HCAA Clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
A4A49_03871 No alias chlorophyll a-b binding protein 36, chloroplastic 0.02 Orthogroups_2024-Update
A4A49_33198 No alias chlorophyll a-b binding protein p4, chloroplastic 0.02 Orthogroups_2024-Update
At1g29910 No alias Chlorophyll a-b binding protein 3, chloroplastic... 0.02 Orthogroups_2024-Update
At2g34430 No alias Chlorophyll a-b binding protein, chloroplastic... 0.02 Orthogroups_2024-Update
At3g47470 No alias Chlorophyll a-b binding protein, chloroplastic... 0.02 Orthogroups_2024-Update
At3g54890 No alias Chlorophyll a-b binding protein, chloroplastic... 0.02 Orthogroups_2024-Update
At5g54270 No alias Chlorophyll a-b binding protein 3, chloroplastic... 0.02 Orthogroups_2024-Update
Bradi1g23610 No alias photosystem I light harvesting complex gene 2 0.03 Orthogroups_2024-Update
Bradi1g42670 No alias photosystem I light harvesting complex gene 1 0.02 Orthogroups_2024-Update
Bradi2g16290 No alias photosystem II light harvesting complex gene B1B2 0.03 Orthogroups_2024-Update
Bradi3g36760 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.03 Orthogroups_2024-Update
Bradi4g37210 No alias photosystem II light harvesting complex gene B1B2 0.04 Orthogroups_2024-Update
Brara.C02638.1 No alias component *(LHCb5) of LHC-II complex 0.02 Orthogroups_2024-Update
Brara.D00100.1 No alias component *(LHCa2) of LHC-I complex 0.03 Orthogroups_2024-Update
Brara.F01756.1 No alias component *(LHCa4) of LHC-I complex 0.02 Orthogroups_2024-Update
Brara.G01921.1 No alias component *(LHCa2) of LHC-I complex 0.02 Orthogroups_2024-Update
Glyma.02G064700 No alias photosystem I light harvesting complex gene 1 0.03 Orthogroups_2024-Update
Glyma.02G305400 No alias photosystem II light harvesting complex gene 2.1 0.04 Orthogroups_2024-Update
Glyma.04G167900 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.04 Orthogroups_2024-Update
Glyma.06G194900 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.03 Orthogroups_2024-Update
Glyma.09G154700 No alias light harvesting complex of photosystem II 5 0.03 Orthogroups_2024-Update
Glyma.10G177200 No alias light harvesting complex of photosystem II 5 0.02 Orthogroups_2024-Update
Glyma.13G282000 No alias light-harvesting chlorophyll B-binding protein 3 0.02 Orthogroups_2024-Update
Glyma.14G008000 No alias photosystem II light harvesting complex gene 2.1 0.02 Orthogroups_2024-Update
Glyma.16G016100 No alias photosystem I light harvesting complex gene 2 0.02 Orthogroups_2024-Update
Glyma.16G145800 No alias photosystem I light harvesting complex gene 1 0.03 Orthogroups_2024-Update
Glyma.16G205200 No alias light harvesting complex of photosystem II 5 0.03 Orthogroups_2024-Update
Glyma.20G212900 No alias light harvesting complex of photosystem II 5 0.03 Orthogroups_2024-Update
HORVU2Hr1G036960.9 No alias component *(LHCa2) of LHC-I complex 0.02 Orthogroups_2024-Update
HORVU2Hr1G040780.4 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
HORVU4Hr1G015260.2 No alias component *(LHCb5) of LHC-II complex 0.02 Orthogroups_2024-Update
HORVU5Hr1G066280.1 No alias component *(LHCa4) of LHC-I complex 0.02 Orthogroups_2024-Update
HORVU5Hr1G082420.2 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU7Hr1G058120.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.04 Orthogroups_2024-Update
Kfl00009_0510 kfl00009_0510_v1.1 (at3g54890 : 130.0) Encodes a component of the light... 0.03 Orthogroups_2024-Update
LOC_Os01g52240 No alias chlorophyll A-B binding protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g37550 No alias chlorophyll A-B binding protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10431300g0020 No alias (p10049|cb21_pinth : 457.0) Chlorophyll a-b binding... 0.03 Orthogroups_2024-Update
MA_176279g0010 No alias (at4g10340 : 387.0) photosystem II encoding the... 0.03 Orthogroups_2024-Update
MA_97315g0010 No alias (p15193|cb2a_pinsy : 556.0) Chlorophyll a-b binding... 0.04 Orthogroups_2024-Update
Mp7g06740.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Orthogroups_2024-Update
PSME_00044304-RA No alias (p13869|cb12_pethy : 391.0) Chlorophyll a-b binding... 0.02 Orthogroups_2024-Update
PSME_00045363-RA No alias (at3g54890 : 352.0) Encodes a component of the light... 0.03 Orthogroups_2024-Update
PSME_00053914-RA No alias (p10049|cb21_pinth : 483.0) Chlorophyll a-b binding... 0.02 Orthogroups_2024-Update
PSME_00054494-RA No alias (p10049|cb21_pinth : 389.0) Chlorophyll a-b binding... 0.03 Orthogroups_2024-Update
PSME_00054524-RA No alias (p10049|cb21_pinth : 468.0) Chlorophyll a-b binding... 0.02 Orthogroups_2024-Update
PSME_00056454-RA No alias (p15194|cb2b_pinsy : 543.0) Chlorophyll a-b binding... 0.04 Orthogroups_2024-Update
Potri.006G139600 No alias photosystem I light harvesting complex gene 6 0.03 Orthogroups_2024-Update
Potri.014G165100 No alias photosystem II light harvesting complex gene 2.1 0.02 Orthogroups_2024-Update
Pp1s1_625V6 No alias chlorophyll a b binding 0.03 Orthogroups_2024-Update
Pp1s23_96V6 No alias chlorophyll a-b binding protein of lhcii 0.02 Orthogroups_2024-Update
Pp1s254_3V6 No alias light-harvesting complex ii protein lhcb3 0.03 Orthogroups_2024-Update
Pp1s256_10V6 No alias chlorophyll a b binding 0.02 Orthogroups_2024-Update
Pp1s330_37V6 No alias chlorophyll a-b binding protein 0.03 Orthogroups_2024-Update
Pp1s628_7V6 No alias light-harvesting complex ii protein lhcb5 0.04 Orthogroups_2024-Update
Pp1s651_2V6 No alias chlorophyll a-b binding protein 0.03 Orthogroups_2024-Update
Solyc02g070970 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.02 Orthogroups_2024-Update
Solyc02g070990 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.02 Orthogroups_2024-Update
Solyc06g069730 No alias chlorophyll a-b binding protein Cab12 0.02 Orthogroups_2024-Update
Solyc07g047850 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.02 Orthogroups_2024-Update
Solyc12g006140 No alias Cab-5 gene encoding chlorophyll a/b-binding protein 0.02 Orthogroups_2024-Update
Solyc12g011450 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.02 Orthogroups_2024-Update
Sopen02g020010 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen02g020020 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen02g020030 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update
Sopen02g020040 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update
Sopen02g020050 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update
Sopen02g020060 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update
Sopen02g020070 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen02g020080 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen02g020090 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen03g001770 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen03g001780 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen03g001790 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen03g034880 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen05g034460 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen05g034480 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen06g027030 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen07g024290 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen07g031780 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen08g021280 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen10g002190 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen12g002100 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update
Sopen12g006800 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0098809 nitrite reductase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 67 232
No external refs found!