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  5. Mp7g05710.1

Mp7g05710.1


Description : Protein MODIFIER OF SNC1 1 OS=Arabidopsis thaliana (sp|q9sb63|mos1_arath : 96.3)


Gene families : OG_42_0008071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp7g05710.1
Cluster HCAA Clusters: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
443140 No alias modifier of snc1 0.02 Orthogroups_2024-Update
Bradi4g04400 No alias modifier of snc1 0.03 Orthogroups_2024-Update
Glyma.05G039400 No alias modifier of snc1 0.06 Orthogroups_2024-Update
Glyma.17G087600 No alias modifier of snc1 0.05 Orthogroups_2024-Update
Kfl00476_0060 kfl00476_0060_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.015G079800 No alias modifier of snc1 0.02 Orthogroups_2024-Update
Sopen03g031740 No alias BAT2 N-terminus 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
CC GO:0033643 host cell part IEP Predicted GO
CC GO:0033646 host intracellular part IEP Predicted GO
CC GO:0033647 host intracellular organelle IEP Predicted GO
CC GO:0033648 host intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0042025 host cell nucleus IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
CC GO:0044217 other organism part IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!