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  5. Mp7g06790.1

Mp7g06790.1


Description : component LHCb1/2/3 of LHC-II complex


Gene families : OG_42_0000070 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp7g06790.1
Cluster HCAA Clusters: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
444370 No alias light harvesting complex of photosystem II 5 0.02 Orthogroups_2024-Update
A4A49_12650 No alias chlorophyll a-b binding protein 6a, chloroplastic 0.03 Orthogroups_2024-Update
A4A49_14365 No alias chlorophyll a-b binding protein 21, chloroplastic 0.03 Orthogroups_2024-Update
A4A49_24464 No alias chlorophyll a-b binding protein 36, chloroplastic 0.03 Orthogroups_2024-Update
A4A49_25385 No alias chlorophyll a-b binding protein cp26, chloroplastic 0.03 Orthogroups_2024-Update
A4A49_33198 No alias chlorophyll a-b binding protein p4, chloroplastic 0.02 Orthogroups_2024-Update
A4A49_60962 No alias chlorophyll a-b binding protein 50, chloroplastic 0.03 Orthogroups_2024-Update
A4A49_61087 No alias chlorophyll a-b binding protein 50, chloroplastic 0.03 Orthogroups_2024-Update
A4A49_64136 No alias chlorophyll a-b binding protein 13, chloroplastic 0.02 Orthogroups_2024-Update
At1g29910 No alias Chlorophyll a-b binding protein 3, chloroplastic... 0.02 Orthogroups_2024-Update
At3g27690 No alias Chlorophyll a-b binding protein, chloroplastic... 0.02 Orthogroups_2024-Update
At3g54890 No alias Chlorophyll a-b binding protein, chloroplastic... 0.02 Orthogroups_2024-Update
At4g10340 No alias Chlorophyll a-b binding protein, chloroplastic... 0.03 Orthogroups_2024-Update
Bradi1g23610 No alias photosystem I light harvesting complex gene 2 0.02 Orthogroups_2024-Update
Bradi1g24760 No alias light-harvesting chlorophyll B-binding protein 3 0.02 Orthogroups_2024-Update
Bradi1g42670 No alias photosystem I light harvesting complex gene 1 0.02 Orthogroups_2024-Update
Bradi2g16290 No alias photosystem II light harvesting complex gene B1B2 0.02 Orthogroups_2024-Update
Bradi3g36760 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.02 Orthogroups_2024-Update
Bradi3g58020 No alias photosystem I light harvesting complex gene 5 0.02 Orthogroups_2024-Update
Bradi4g27480 No alias Chlorophyll A-B binding family protein 0.01 Orthogroups_2024-Update
Bradi4g30060 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.02 Orthogroups_2024-Update
Bradi4g31257 No alias photosystem I light harvesting complex gene 6 0.03 Orthogroups_2024-Update
Brara.B03307.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Brara.C01741.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Brara.C02638.1 No alias component *(LHCb5) of LHC-II complex 0.04 Orthogroups_2024-Update
Brara.C04035.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Brara.D02090.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Brara.E00980.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.E00981.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Brara.E00982.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Brara.H01921.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Brara.I00297.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Brara.I02349.1 No alias component *(LHCb5) of LHC-II complex 0.02 Orthogroups_2024-Update
Brara.I03747.1 No alias component *(LHCa1) of LHC-I complex 0.02 Orthogroups_2024-Update
Brara.J00907.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Brara.K00763.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Cre04.g232104 No alias photosystem II light harvesting complex gene 2.1 0.02 Orthogroups_2024-Update
Cre06.g272650 No alias photosystem I light harvesting complex gene 5 0.02 Orthogroups_2024-Update
Cre06.g283050 No alias photosystem I light harvesting complex gene 1 0.02 Orthogroups_2024-Update
Cre06.g283950 No alias photosystem II light harvesting complex gene 2.1 0.01 Orthogroups_2024-Update
Cre06.g284200 No alias photosystem II light harvesting complex gene 2.2 0.01 Orthogroups_2024-Update
Cre06.g284250 No alias photosystem II light harvesting complex gene 2.1 0.01 Orthogroups_2024-Update
Cre06.g285250 No alias photosystem II light harvesting complex gene 2.1 0.02 Orthogroups_2024-Update
Cre07.g344950 No alias photosystem I light harvesting complex gene 5 0.02 Orthogroups_2024-Update
Cre10.g425900 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.02 Orthogroups_2024-Update
Cre12.g508750 No alias photosystem I light harvesting complex gene 6 0.02 Orthogroups_2024-Update
Cre12.g548400 No alias photosystem II light harvesting complex gene 2.2 0.01 Orthogroups_2024-Update
Cre16.g673650 No alias light harvesting complex of photosystem II 5 0.02 Orthogroups_2024-Update
Cre16.g687900 No alias photosystem I light harvesting complex gene 5 0.02 Orthogroups_2024-Update
GRMZM2G072280 No alias photosystem I light harvesting complex gene 2 0.03 Orthogroups_2024-Update
GRMZM2G103101 No alias photosystem I light harvesting complex gene 5 0.03 Orthogroups_2024-Update
GRMZM2G153184 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.02 Orthogroups_2024-Update
GRMZM2G429955 No alias photosystem II light harvesting complex gene B1B2 0.02 Orthogroups_2024-Update
Glyma.02G080800 No alias light-harvesting chlorophyll-protein complex II subunit B1 0.03 Orthogroups_2024-Update
Glyma.03G262300 No alias photosystem I light harvesting complex gene 2 0.04 Orthogroups_2024-Update
Glyma.05G128000 No alias chlorophyll A/B binding protein 1 0.04 Orthogroups_2024-Update
Glyma.07G047600 No alias photosystem I light harvesting complex gene 2 0.03 Orthogroups_2024-Update
Glyma.08G082900 No alias chlorophyll A/B binding protein 1 0.03 Orthogroups_2024-Update
Glyma.09G154700 No alias light harvesting complex of photosystem II 5 0.04 Orthogroups_2024-Update
Glyma.12G219300 No alias light-harvesting chlorophyll B-binding protein 3 0.02 Orthogroups_2024-Update
Glyma.16G145800 No alias photosystem I light harvesting complex gene 1 0.03 Orthogroups_2024-Update
Glyma.16G165200 No alias light-harvesting chlorophyll-protein complex II subunit B1 0.03 Orthogroups_2024-Update
Glyma.16G165800 No alias light-harvesting chlorophyll-protein complex II subunit B1 0.03 Orthogroups_2024-Update
Glyma.16G205200 No alias light harvesting complex of photosystem II 5 0.02 Orthogroups_2024-Update
Glyma.20G212900 No alias light harvesting complex of photosystem II 5 0.02 Orthogroups_2024-Update
HORVU1Hr1G078380.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU1Hr1G088880.2 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
HORVU1Hr1G088900.2 No alias component *(LHCb1/2/3) of LHC-II complex 0.04 Orthogroups_2024-Update
HORVU1Hr1G088920.3 No alias component *(LHCb1/2/3) of LHC-II complex 0.04 Orthogroups_2024-Update
HORVU1Hr1G089180.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU2Hr1G036960.9 No alias component *(LHCa2) of LHC-I complex 0.02 Orthogroups_2024-Update
HORVU2Hr1G040780.4 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU4Hr1G015260.2 No alias component *(LHCb5) of LHC-II complex 0.02 Orthogroups_2024-Update
HORVU5Hr1G062240.1 No alias linker protein *(LHCa6) between PS-I complex and NDH complex 0.02 Orthogroups_2024-Update
HORVU5Hr1G066280.1 No alias component *(LHCa4) of LHC-I complex 0.03 Orthogroups_2024-Update
HORVU5Hr1G082420.2 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
HORVU5Hr1G087250.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU5Hr1G109250.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
HORVU5Hr1G109260.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU5Hr1G109360.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU5Hr1G124160.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU6Hr1G016850.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU6Hr1G016880.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.04 Orthogroups_2024-Update
HORVU6Hr1G016890.6 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU6Hr1G016940.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU6Hr1G091660.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU7Hr1G040370.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
HORVU7Hr1G040380.5 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Kfl00009_0510 kfl00009_0510_v1.1 (at3g54890 : 130.0) Encodes a component of the light... 0.02 Orthogroups_2024-Update
Kfl00023_0070 kfl00023_0070_v1.1 (at3g47470 : 285.0) Encodes a chlorophyll a/b-binding... 0.02 Orthogroups_2024-Update
Kfl00098_0080 kfl00098_0080_v1.1 (p27495|cb24_tobac : 391.0) Chlorophyll a-b binding... 0.01 Orthogroups_2024-Update
Kfl00098_0090 kfl00098_0090_v1.1 (p27495|cb24_tobac : 389.0) Chlorophyll a-b binding... 0.02 Orthogroups_2024-Update
Kfl00104_0350 kfl00104_0350_v1.1 (at4g10340 : 325.0) photosystem II encoding the... 0.03 Orthogroups_2024-Update
Kfl00564_0030 kfl00564_0030_v1.1 (p13869|cb12_pethy : 291.0) Chlorophyll a-b binding... 0.02 Orthogroups_2024-Update
Kfl01434_0010 kfl01434_0010_v1.1 (p27493|cb22_tobac : 410.0) Chlorophyll a-b binding... 0.02 Orthogroups_2024-Update
LOC_Os02g52650 No alias chlorophyll A-B binding protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os07g37550 No alias chlorophyll A-B binding protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g33820 No alias chlorophyll A-B binding protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10431300g0020 No alias (p10049|cb21_pinth : 457.0) Chlorophyll a-b binding... 0.02 Orthogroups_2024-Update
MA_10431493g0010 No alias (at3g54890 : 355.0) Encodes a component of the light... 0.02 Orthogroups_2024-Update
MA_10435703g0010 No alias (at1g76570 : 152.0) Chlorophyll A-B binding family... 0.02 Orthogroups_2024-Update
MA_131587g0010 No alias (p15194|cb2b_pinsy : 453.0) Chlorophyll a-b binding... 0.02 Orthogroups_2024-Update
MA_65346g0010 No alias (at3g47470 : 317.0) Encodes a chlorophyll a/b-binding... 0.02 Orthogroups_2024-Update
MA_97315g0010 No alias (p15193|cb2a_pinsy : 556.0) Chlorophyll a-b binding... 0.02 Orthogroups_2024-Update
Mp7g06750.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Orthogroups_2024-Update
Mp7g06770.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Orthogroups_2024-Update
PSME_00014591-RA No alias (at4g10340 : 418.0) photosystem II encoding the... 0.02 Orthogroups_2024-Update
PSME_00020247-RA No alias (at3g47470 : 395.0) Encodes a chlorophyll a/b-binding... 0.02 Orthogroups_2024-Update
PSME_00044304-RA No alias (p13869|cb12_pethy : 391.0) Chlorophyll a-b binding... 0.02 Orthogroups_2024-Update
PSME_00056454-RA No alias (p15194|cb2b_pinsy : 543.0) Chlorophyll a-b binding... 0.02 Orthogroups_2024-Update
Potri.002G221400 No alias photosystem II light harvesting complex gene 2.2 0.03 Orthogroups_2024-Update
Potri.003G020400 No alias light harvesting complex photosystem II subunit 6 0.04 Orthogroups_2024-Update
Potri.014G165100 No alias photosystem II light harvesting complex gene 2.1 0.02 Orthogroups_2024-Update
Potri.019G063100 No alias light harvesting complex of photosystem II 5 0.02 Orthogroups_2024-Update
Pp1s12_390V6 No alias chlorophyll a b binding 0.03 Orthogroups_2024-Update
Pp1s158_109V6 No alias chlorophyll a-b binding protein 6a 0.04 Orthogroups_2024-Update
Pp1s161_32V6 No alias lhca1.2 gene for putative chlorophyll a-b binding protein Lhca1.2 0.02 Orthogroups_2024-Update
Pp1s182_81V6 No alias chlorophyll a b binding 0.03 Orthogroups_2024-Update
Pp1s19_13V6 No alias light-harvesting complex ii protein lhcb2 0.04 Orthogroups_2024-Update
Pp1s1_625V6 No alias chlorophyll a b binding 0.03 Orthogroups_2024-Update
Pp1s215_109V6 No alias chlorophyll a b binding 0.01 Orthogroups_2024-Update
Pp1s241_66V6 No alias chlorophyll a-b binding protein 0.03 Orthogroups_2024-Update
Pp1s247_7V6 No alias chlorophyll a-b binding protein 6a 0.04 Orthogroups_2024-Update
Pp1s254_3V6 No alias light-harvesting complex ii protein lhcb3 0.04 Orthogroups_2024-Update
Pp1s256_10V6 No alias chlorophyll a b binding 0.04 Orthogroups_2024-Update
Pp1s27_97V6 No alias light-harvesting complex ii protein lhcb2 0.03 Orthogroups_2024-Update
Pp1s330_37V6 No alias chlorophyll a-b binding protein 0.03 Orthogroups_2024-Update
Pp1s628_7V6 No alias light-harvesting complex ii protein lhcb5 0.02 Orthogroups_2024-Update
Pp1s651_2V6 No alias chlorophyll a-b binding protein 0.02 Orthogroups_2024-Update
Pp1s6_312V6 No alias light-harvesting complex ii protein lhcb5 0.03 Orthogroups_2024-Update
Pp1s76_196V6 No alias chlorophyll a b binding 0.03 Orthogroups_2024-Update
Seita.1G330600.1 No alias linker protein *(LHCa5) between PS-I complex and NDH complex 0.02 Orthogroups_2024-Update
Seita.2G352900.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Sobic.002G159100.1 No alias component *(LHCq) of LHC-II complex 0.03 Orthogroups_2024-Update
Sobic.002G288300.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Sobic.002G289100.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Sobic.002G339200.2 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Sobic.002G352100.1 No alias component *(LHCa2) of LHC-I complex 0.02 Orthogroups_2024-Update
Sobic.003G209900.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Sobic.007G136900.1 No alias component *(LHCa4) of LHC-I complex 0.02 Orthogroups_2024-Update
Sobic.009G234600.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Solyc02g070940 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.02 Orthogroups_2024-Update
Solyc03g005770 No alias chlorophyll a/b-binding protein 0.02 Orthogroups_2024-Update
Solyc03g005790 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.02 Orthogroups_2024-Update
Solyc05g056070 No alias photosystem 1 protein 0.02 Orthogroups_2024-Update
Solyc06g063370 No alias Type I (26 kD) CP29 polypeptide 0.02 Orthogroups_2024-Update
Sopen02g019860 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen02g020040 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen03g001770 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen06g022840 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen10g002190 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
evm.model.contig_3421.1 No alias (at3g54890 : 82.4) Encodes a component of the light... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006007 glucose catabolic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0007155 cell adhesion IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
MF GO:0015293 symporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predicted GO
BP GO:0019320 hexose catabolic process IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0022610 biological adhesion IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0046365 monosaccharide catabolic process IEP Predicted GO
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predicted GO
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Predicted GO
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 66 231
No external refs found!