At5g18560

Description : PUCHI [Source:UniProtKB/TrEMBL;Acc:A0A178URC3]

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At5g18560
Cluster	HCCA clusters: Cluster_220

Target	Alias	Description	ECC score	Gene Family Method
A4A49_02884	No alias	ethylene-responsive transcription factor 14	0.03	Orthogroups_2024-Update
A4A49_03202	No alias	ethylene-responsive transcription factor erf053	0.03	Orthogroups_2024-Update
At1g22810	No alias	Ethylene-responsive transcription factor ERF019...	0.03	Orthogroups_2024-Update
At4g11140	No alias	Ethylene-responsive transcription factor CRF1...	0.03	Orthogroups_2024-Update
Bradi2g56145	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi4g03371	No alias	related to AP2 11	0.04	Orthogroups_2024-Update
Bradi5g08380	No alias	related to AP2 6l	0.02	Orthogroups_2024-Update
Bradi5g17640	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Brara.B00415.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.C01790.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.G02121.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.H01375.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
Brara.I01413.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.K01031.1	No alias	subgroup ERF-II-DEAR transcription factor	0.04	Orthogroups_2024-Update
GRMZM2G039112	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
GRMZM2G149756	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G174917	No alias	DREB and EAR motif protein 3	0.03	Orthogroups_2024-Update
Glyma.01G232000	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.03G112100	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Glyma.03G112700	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Glyma.05G049800	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.11G014800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.13G216900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.15G095600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.19G164100	No alias	ethylene response factor 1	0.02	Orthogroups_2024-Update
Glyma.20G172800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
HORVU1Hr1G090250.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
LOC_Os04g55520	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g40150	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_45733g0020	No alias	(at1g74930 : 120.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00009547-RA	No alias	(at4g17500 : 103.0) Encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00056166-RA	No alias	(at5g11590 : 103.0) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
Potri.002G043300	No alias	erf domain protein 9	0.05	Orthogroups_2024-Update
Potri.002G124000	No alias	related to AP2 1	0.03	Orthogroups_2024-Update
Potri.004G047500	No alias	ERF domain protein 12	0.04	Orthogroups_2024-Update
Potri.010G006800	No alias	ethylene-responsive element binding protein	0.03	Orthogroups_2024-Update
Potri.014G046700	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Seita.1G351800.1	No alias	subgroup ERF-V transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G212000.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.02	Orthogroups_2024-Update
Sobic.004G100500.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Sobic.004G179900.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Solyc06g054630	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.04	Orthogroups_2024-Update
Sopen02g033000	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen05g029570	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Predicted GO
BP	GO:0000075	cell cycle checkpoint	IEP	Predicted GO
BP	GO:0000077	DNA damage checkpoint	IEP	Predicted GO
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	Predicted GO
MF	GO:0004655	porphobilinogen synthase activity	IEP	Predicted GO
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0006826	iron ion transport	IEP	Predicted GO
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Predicted GO
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predicted GO
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Predicted GO
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Predicted GO
CC	GO:0030896	checkpoint clamp complex	IEP	Predicted GO
BP	GO:0031570	DNA integrity checkpoint	IEP	Predicted GO
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Predicted GO
BP	GO:0034755	iron ion transmembrane transport	IEP	Predicted GO
CC	GO:0035145	exon-exon junction complex	IEP	Predicted GO
BP	GO:0042254	ribosome biogenesis	IEP	Predicted GO
CC	GO:0044428	nuclear part	IEP	Predicted GO
CC	GO:0044454	nuclear chromosome part	IEP	Predicted GO
BP	GO:0045786	negative regulation of cell cycle	IEP	Predicted GO
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	IEP	Predicted GO
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	57	103

External Links

No external refs found!

At5g18560

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation