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  5. At5g18770

At5g18770


Description : F-box/FBD/LRR-repeat protein At5g18770 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZK9]


Gene families : OG_42_0000773 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000773_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g18770
Cluster HCCA clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
At5g22700 No alias F-box/RNI-like/FBD-like domains-containing protein... 0.03 Orthogroups_2024-Update
Brara.C00851.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J01457.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
MF GO:0004357 glutamate-cysteine ligase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004659 prenyltransferase activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006808 regulation of nitrogen utilization IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008318 protein prenyltransferase activity IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
BP GO:0018342 protein prenylation IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
CC GO:0070652 HAUS complex IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0097354 prenylation IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 26 63
IPR013101 Leu-rich_rpt_2 177 202
IPR006566 FBD 386 428
No external refs found!