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  5. At5g18820

At5g18820


Description : Chaperonin 60 subunit alpha 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q56XV8]


Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g18820
Cluster HCCA clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
405358 No alias heat shock protein 60 0.02 Orthogroups_2024-Update
A4A49_39526 No alias chaperonin 60 subunit beta 4, chloroplastic 0.03 Orthogroups_2024-Update
Bradi1g50270 No alias chaperonin 60 beta 0.05 Orthogroups_2024-Update
Bradi4g38090 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
Brara.C03936.1 No alias chaperone *(Hsp60) 0.03 Orthogroups_2024-Update
Brara.E01070.1 No alias chaperone *(Hsp60) 0.03 Orthogroups_2024-Update
Brara.G01341.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
Cre06.g309100 No alias heat shock protein 60 0.02 Orthogroups_2024-Update
GRMZM2G074790 No alias heat shock protein 60-3A 0.03 Orthogroups_2024-Update
GRMZM2G416120 No alias heat shock protein 60 0.03 Orthogroups_2024-Update
Glyma.07G009600 No alias heat shock protein 60-3A 0.03 Orthogroups_2024-Update
Glyma.10G127800 No alias heat shock protein 60 0.03 Orthogroups_2024-Update
HORVU7Hr1G006490.2 No alias chaperone *(Hsp60) & subunit beta of CPN60 assembly... 0.02 Orthogroups_2024-Update
Kfl00076_0150 kfl00076_0150_v1.... (p08927|rubb_pea : 851.0) RuBisCO large subunit-binding... 0.03 Orthogroups_2024-Update
MA_97627g0010 No alias (p08927|rubb_pea : 646.0) RuBisCO large subunit-binding... 0.03 Orthogroups_2024-Update
PSME_00016110-RA No alias (p08926|ruba_pea : 852.0) RuBisCO large subunit-binding... 0.03 Orthogroups_2024-Update
Seita.3G283900.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
Seita.4G010900.1 No alias chaperone *(Hsp60) & subunit beta of Cpn60 chaperonin... 0.04 Orthogroups_2024-Update
Sobic.001G437801.1 No alias subunit beta of CPN60 assembly chaperone heterodimer &... 0.03 Orthogroups_2024-Update
Sobic.010G011200.1 No alias chaperone *(Hsp60) & subunit beta of CPN60 assembly... 0.02 Orthogroups_2024-Update
Solyc03g120850 No alias Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU) 0.06 Orthogroups_2024-Update
Solyc05g053470 No alias Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH) 0.04 Orthogroups_2024-Update
Solyc11g069790 No alias Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI) 0.04 Orthogroups_2024-Update
Sopen03g039670 No alias TCP-1/cpn60 chaperonin family 0.03 Orthogroups_2024-Update
Sopen03g040450 No alias TCP-1/cpn60 chaperonin family 0.04 Orthogroups_2024-Update
evm.model.contig_4417.1 No alias (at2g28000 : 575.0) Encodes chaperonin-60 alpha, a... 0.02 Orthogroups_2024-Update
evm.model.contig_552.1 No alias (q05046|ch62_cucma : 684.0) Chaperonin CPN60-2,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Predicted GO
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP Predicted GO
BP GO:0009435 NAD biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
BP GO:0019674 NAD metabolic process IEP Predicted GO
BP GO:0019748 secondary metabolic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0044550 secondary metabolite biosynthetic process IEP Predicted GO
BP GO:0046937 phytochelatin metabolic process IEP Predicted GO
BP GO:0046938 phytochelatin biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 55 558
No external refs found!