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  5. Mp7g12140.1

Mp7g12140.1


Description : Sdo1 LSU processome maturation factor


Gene families : OG_42_0006492 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006492_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp7g12140.1
Cluster HCAA Clusters: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Glyma.14G119400 No alias sequence-specific DNA binding transcription factors 0.02 Orthogroups_2024-Update
HORVU2Hr1G099410.1 No alias LSU processome maturation factor *(Sdo1) 0.03 Orthogroups_2024-Update
Solyc04g064570 No alias Ribosome maturation SBDS (AHRD V3.3 *** A0A0B0ME10_GOSAR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0042254 ribosome biogenesis IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006480 N-terminal protein amino acid methylation IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
BP GO:0031365 N-terminal protein amino acid modification IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR018978 Ribosome_mat_SBDS_C 110 225
IPR019783 Ribosome_mat_SBDS_N 16 102
No external refs found!