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  5. At5g19200

At5g19200


Description : 3-dehydrosphinganine reductase TSC10B [Source:UniProtKB/Swiss-Prot;Acc:F4JZN6]


Gene families : OG_42_0001397 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001397_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g19200
Cluster HCCA clusters: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
A4A49_21552 No alias 3-dehydrosphinganine reductase tsc10a 0.03 Orthogroups_2024-Update
At3g06060 No alias NAD(P)-binding Rossmann-fold superfamily protein... 0.03 Orthogroups_2024-Update
Kfl00029_0410 kfl00029_0410_v1.1 (at5g19200 : 125.0) NAD(P)-binding Rossmann-fold... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002347 SDR_fam 39 228
No external refs found!