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  5. Solyc03g115040

Solyc03g115040


Description : LOW QUALITY:disease resistance protein (TIR-NBS-LRR class) family (AHRD V3.3 --* AT4G19530.2)


Gene families : OG_42_0000468 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000468_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g115040
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Brara.B00801.1 No alias A1-class (Pepsin) protease 0.04 Orthogroups_2024-Update
Brara.I05538.1 No alias A1-class (Pepsin) protease 0.03 Orthogroups_2024-Update
MA_2704g0010 No alias (at1g03230 : 95.9) Eukaryotic aspartyl protease family... 0.03 Orthogroups_2024-Update
MA_96623g0010 No alias (at1g03230 : 263.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
Sobic.009G131400.2 No alias A1-class (Pepsin) protease 0.05 Orthogroups_2024-Update
Sopen01g031710 No alias Xylanase inhibitor C-terminal 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
BP GO:0006848 pyruvate transport IEP Predicted GO
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Predicted GO
BP GO:0015718 monocarboxylic acid transport IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
MF GO:0052736 beta-glucanase activity IEP Predicted GO
MF GO:0052861 glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1901475 pyruvate transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!