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  5. At5g19520

At5g19520


Description : Mechanosensitive ion channel protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84M97]


Gene families : OG_42_0000648 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g19520
Cluster HCCA clusters: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
Brara.C00884.1 No alias mechanosensitive ion channel *(MSL) 0.04 Orthogroups_2024-Update
Glyma.06G055400 No alias mechanosensitive channel of small conductance-like 10 0.02 Orthogroups_2024-Update
Glyma.09G067800 No alias mechanosensitive channel of small conductance-like 10 0.03 Orthogroups_2024-Update
Kfl00147_0015 kfl00147_0015_v1.1 (at1g78610 : 185.0) mechanosensitive channel of small... 0.01 Orthogroups_2024-Update
Seita.4G086200.1 No alias mechanosensitive ion channel *(MSL) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR006685 MscS_channel 524 727
No external refs found!