1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp7g18590.1

Mp7g18590.1


Description : Putative DEAD-box ATP-dependent RNA helicase 29 OS=Arabidopsis thaliana (sp|o49289|rh29_arath : 773.0)


Gene families : OG_42_0005894 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005894_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp7g18590.1
Cluster HCAA Clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
438217 No alias hydrolases, acting on acid anhydrides, in... 0.03 Orthogroups_2024-Update
Brara.G02154.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Cre12.g513701 No alias hydrolases, acting on acid anhydrides, in... 0.03 Orthogroups_2024-Update
Glyma.16G221700 No alias hydrolases, acting on acid anhydrides, in... 0.02 Orthogroups_2024-Update
HORVU4Hr1G083970.6 No alias Unknown function 0.02 Orthogroups_2024-Update
Potri.005G185900 No alias hydrolases, acting on acid anhydrides, in... 0.02 Orthogroups_2024-Update
Pp1s409_13V6 No alias dead box atp-dependent rna 0.01 Orthogroups_2024-Update
Seita.6G145100.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.007G126500.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc10g009070 No alias RNA helicase DEAD32 0.03 Orthogroups_2024-Update
Sopen10g004850 No alias DEAD/DEAH box helicase 0.03 Orthogroups_2024-Update
evm.model.tig00022075.32 No alias (at1g77030 : 499.0) hydrolases, acting on acid... 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0003723 RNA binding IEA 16Dec
MF GO:0003724 RNA helicase activity IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0005634 nucleus IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003852 2-isopropylmalate synthase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004819 glutamine-tRNA ligase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006474 N-terminal protein amino acid acetylation IEP Predicted GO
BP GO:0006551 leucine metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008192 RNA guanylyltransferase activity IEP Predicted GO
MF GO:0008193 tRNA guanylyltransferase activity IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0009098 leucine biosynthetic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0016255 attachment of GPI anchor to protein IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP Predicted GO
BP GO:0018206 peptidyl-methionine modification IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0031365 N-terminal protein amino acid modification IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
CC GO:0031414 N-terminal protein acetyltransferase complex IEP Predicted GO
CC GO:0031417 NatC complex IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
MF GO:0070568 guanylyltransferase activity IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 240 351
IPR012541 DBP10_C 626 687
IPR011545 DEAD/DEAH_box_helicase_dom 37 203
No external refs found!