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Description : pectate lyase
Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Marchantia polymorpha: Mp8g00770.1 | |
| Cluster | HCAA Clusters: Cluster_88 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 407495 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| A4A49_08453 | No alias | putative pectate lyase 5 | 0.02 | Orthogroups_2024-Update | |
| A4A49_12542 | No alias | pectate lyase | 0.02 | Orthogroups_2024-Update | |
| A4A49_23917 | No alias | putative pectate lyase 13 | 0.02 | Orthogroups_2024-Update | |
| A4A49_24630 | No alias | putative pectate lyase 3 | 0.02 | Orthogroups_2024-Update | |
| At1g14420 | No alias | Probable pectate lyase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S2] | 0.02 | Orthogroups_2024-Update | |
| At3g53190 | No alias | Pectate lyase [Source:UniProtKB/TrEMBL;Acc:Q56XU8] | 0.03 | Orthogroups_2024-Update | |
| Brara.D00702.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.02 | Orthogroups_2024-Update | |
| Brara.H01597.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.02 | Orthogroups_2024-Update | |
| LOC_Os06g05260 | No alias | pectate lyase precursor, putative, expressed | 0.01 | Orthogroups_2024-Update | |
| PSME_00000524-RA | No alias | (at4g24780 : 590.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
| PSME_00005709-RA | No alias | (at3g07010 : 494.0) Pectin lyase-like superfamily... | 0.02 | Orthogroups_2024-Update | |
| PSME_00009672-RA | No alias | (at5g48900 : 608.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
| PSME_00019559-RA | No alias | (at4g13710 : 600.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
| PSME_00029400-RA | No alias | (at5g63180 : 504.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
| PSME_00041064-RA | No alias | (at1g67750 : 595.0) Pectate lyase family protein;... | 0.03 | Orthogroups_2024-Update | |
| Potri.006G122000 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.014G178100 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s173_162V6 | No alias | pectate lyase | 0.03 | Orthogroups_2024-Update | |
| Pp1s206_50V6 | No alias | pectate lyase | 0.03 | Orthogroups_2024-Update | |
| Pp1s409_2V6 | No alias | pectate lyase | 0.02 | Orthogroups_2024-Update | |
| Pp1s92_84V6 | No alias | F12A21.12; pectate lyase family protein [Arabidopsis thaliana] | 0.03 | Orthogroups_2024-Update | |
| Solyc03g111690 | No alias | Pectate lyase family protein (AHRD V3.3 *** AT1G67750.1) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
| BP | GO:0016567 | protein ubiquitination | IEP | Predicted GO |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Predicted GO |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002022 | Pec_lyase | 198 | 382 |
| No external refs found! |