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Description : ssDNA-binding protein (OSB)
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Marchantia polymorpha: Mp8g01790.1 | |
| Cluster | HCAA Clusters: Cluster_4 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 119022 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| At1g74600 | No alias | Pentatricopeptide repeat-containing protein At1g74600,... | 0.02 | Orthogroups_2024-Update | |
| At3g57430 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | Orthogroups_2024-Update | |
| Bradi1g21907 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi1g53600 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.02 | Orthogroups_2024-Update | |
| Bradi5g26900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.18G275000 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.19G102300 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| HORVU1Hr1G043480.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU1Hr1G073180.8 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU2Hr1G028520.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU3Hr1G026110.4 | No alias | RNA editing factor *(DOT4) | 0.02 | Orthogroups_2024-Update | |
| LOC_Os12g01850 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| PSME_00018501-RA | No alias | (at3g46790 : 252.0) Encodes a member of a PCMP (plant... | 0.03 | Orthogroups_2024-Update | |
| PSME_00033049-RA | No alias | (at1g11290 : 583.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
| PSME_00035450-RA | No alias | (at4g33990 : 517.0) embryo defective 2758 (EMB2758);... | 0.02 | Orthogroups_2024-Update | |
| PSME_00053797-RA | No alias | (at4g02750 : 615.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
| PSME_00056374-RA | No alias | (at4g37170 : 594.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| Potri.004G205900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.005G010900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.007G022466 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.016G128900 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.018G092400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Seita.6G228400.1 | No alias | processivity component *(REV7) of DNA polymerase zeta complex | 0.04 | Orthogroups_2024-Update | |
| Solyc02g065030 | No alias | No description available | 0.02 | Orthogroups_2024-Update | |
| Sopen02g038750 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003993 | acid phosphatase activity | IEP | Predicted GO |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Predicted GO |
| BP | GO:0006366 | transcription by RNA polymerase II | IEP | Predicted GO |
| BP | GO:0006457 | protein folding | IEP | Predicted GO |
| BP | GO:0006486 | protein glycosylation | IEP | Predicted GO |
| BP | GO:0006487 | protein N-linked glycosylation | IEP | Predicted GO |
| BP | GO:0018196 | peptidyl-asparagine modification | IEP | Predicted GO |
| BP | GO:0018279 | protein N-linked glycosylation via asparagine | IEP | Predicted GO |
| BP | GO:0043413 | macromolecule glycosylation | IEP | Predicted GO |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Predicted GO |
| CC | GO:0044432 | endoplasmic reticulum part | IEP | Predicted GO |
| MF | GO:0051082 | unfolded protein binding | IEP | Predicted GO |
| No external refs found! |