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At5g20250


Description : Raffinose synthase family protein [Source:UniProtKB/TrEMBL;Acc:F4K470]


Gene families : OG_42_0000676 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000676_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g20250
Cluster HCCA clusters: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
A4A49_20430 No alias putative galactinol--sucrose galactosyltransferase 2 0.03 Orthogroups_2024-Update
Bradi1g48050 No alias Raffinose synthase family protein 0.04 Orthogroups_2024-Update
Brara.B00875.1 No alias galactinol-sucrose galactosyltransferase 0.03 Orthogroups_2024-Update
Brara.I03971.1 No alias alkaline alpha-galactosidase *(SIP2) 0.04 Orthogroups_2024-Update
Brara.J01587.1 No alias galactinol-sucrose galactosyltransferase 0.04 Orthogroups_2024-Update
Glyma.17G111400 No alias Raffinose synthase family protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G020780.5 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os06g07600 No alias uncharacterized glycosyltransferase, putative, expressed 0.03 Orthogroups_2024-Update
MA_18317g0010 No alias (at5g20250 : 863.0) encodes a member of glycosyl... 0.02 Orthogroups_2024-Update
MA_5981g0010 No alias (at5g40390 : 611.0) Encodes a protein which might be... 0.03 Orthogroups_2024-Update
PSME_00025208-RA No alias (at1g55740 : 1032.0) seed imbibition 1 (SIP1); CONTAINS... 0.02 Orthogroups_2024-Update
Potri.011G166700 No alias seed imbibition 1 0.03 Orthogroups_2024-Update
Pp1s8_24V6 No alias stachyose synthase 0.04 Orthogroups_2024-Update
Sobic.010G057300.1 No alias galactinol-sucrose galactosyltransferase 0.03 Orthogroups_2024-Update
Sobic.010G057400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen02g031260 No alias Raffinose synthase or seed imbibition protein Sip1 0.04 Orthogroups_2024-Update
Sopen07g034180 No alias Raffinose synthase or seed imbibition protein Sip1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006751 glutathione catabolic process IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0042219 cellular modified amino acid catabolic process IEP Predicted GO
BP GO:0043171 peptide catabolic process IEP Predicted GO
BP GO:0044273 sulfur compound catabolic process IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
CC GO:0070449 elongin complex IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR008811 Glycosyl_hydrolases_36 7 731
No external refs found!