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  5. At5g20320

At5g20320


Description : Dicer-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P84634]


Gene families : OG_42_0000292 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000292_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g20320
Cluster HCCA clusters: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Bradi1g41980 No alias RNAse II-like 1 0.01 Orthogroups_2024-Update
Bradi2g58270 No alias dicer-like 3 0.02 Orthogroups_2024-Update
Brara.J01580.1 No alias endoribonuclease (DCL4) of transacting siRNA pathway 0.03 Orthogroups_2024-Update
Glyma.09G025300 No alias dicer-like 2 0.03 Orthogroups_2024-Update
LOC_Os09g14610 No alias DCL2, putative, expressed 0.03 Orthogroups_2024-Update
Mp1g02840.1 No alias endoribonuclease (DCL3). endoribonuclease (DCL4) 0.02 Orthogroups_2024-Update
Potri.006G188800 No alias dicer-like 4 0.04 Orthogroups_2024-Update
Solyc07g049150 No alias No description available 0.03 Orthogroups_2024-Update
Solyc10g005130 No alias Dicer-like 1 0.03 Orthogroups_2024-Update
Sopen10g001150 No alias Ribonuclease III domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004525 ribonuclease III activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006396 RNA processing IEA InterProScan predictions
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004357 glutamate-cysteine ligase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0032266 phosphatidylinositol-3-phosphate binding IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 476 590
IPR003100 PAZ_dom 954 1076
IPR011545 DEAD/DEAH_box_helicase_dom 127 287
IPR005034 Dicer_dimerisation_dom 656 744
IPR000999 RNase_III_dom 1327 1436
IPR000999 RNase_III_dom 1119 1251
No external refs found!