1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At5g20340

At5g20340


Description : Probable glucan endo-1,3-beta-glucosidase BG5 [Source:UniProtKB/Swiss-Prot;Acc:O49353]


Gene families : OG_42_0000200 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g20340
Cluster HCCA clusters: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
At5g20560 No alias Glycosyl hydrolase superfamily protein... 0.04 Orthogroups_2024-Update
Glyma.16G113200 No alias Glycosyl hydrolase superfamily protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G105190.4 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
LOC_Os01g71380 No alias glycosyl hydrolases family 17, putative, expressed 0.03 Orthogroups_2024-Update
Mp7g13150.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 Orthogroups_2024-Update
PSME_00017374-RA No alias (p49237|e13b_maize : 292.0) Glucan... 0.03 Orthogroups_2024-Update
PSME_00017375-RA No alias (p23546|e13e_tobac : 273.0) Glucan... 0.02 Orthogroups_2024-Update
PSME_00037376-RA No alias (at4g16260 : 306.0) Glycosyl hydrolase superfamily... 0.03 Orthogroups_2024-Update
Seita.5G448000.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Solyc01g008620 No alias Beta-1,3-glucanase (AHRD V3.3 *** Q9SYX6_TOBAC) 0.03 Orthogroups_2024-Update
Solyc02g086700 No alias Beta-1,3-glucanase (AHRD V3.3 *** Q9SYX6_TOBAC) 0.03 Orthogroups_2024-Update
Solyc11g065280 No alias beta-1,3-glucanase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 43 353
No external refs found!