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  5. Mp8g11720.1

Mp8g11720.1


Description : Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana (sp|q9she7|rub1_arath : 176.0)


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Marchantia polymorpha: Mp8g11720.1

Target Alias Description ECC score Gene Family Method Actions
A4A49_29449 No alias polyubiquitin 4 0.01 Orthogroups_2024-Update
At2g36170 No alias Ubiquitin-60S ribosomal protein L40-1... 0.02 Orthogroups_2024-Update
At5g37640 No alias Polyubiquitin 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHQ6] 0.06 Orthogroups_2024-Update
Bradi2g12280 No alias Ribosomal protein S27a / Ubiquitin family protein 0.02 Orthogroups_2024-Update
Bradi2g28050 No alias Ubiquitin supergroup;Ribosomal protein L40e 0.01 Orthogroups_2024-Update
Bradi2g34750 No alias Ribosomal protein S27a / Ubiquitin family protein 0.02 Orthogroups_2024-Update
Bradi4g30470 No alias related to ubiquitin 1 0.03 Orthogroups_2024-Update
Bradi4g38540 No alias ubiquitin extension protein 1 0.02 Orthogroups_2024-Update
Brara.C01815.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Brara.C02349.1 No alias component *(eS31) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Brara.I03566.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.01 Orthogroups_2024-Update
Brara.J02833.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Cre06.g273600 No alias Ribosomal protein S27a / Ubiquitin family protein 0.01 Orthogroups_2024-Update
GRMZM2G006293 No alias Ribosomal protein S27a / Ubiquitin family protein 0.01 Orthogroups_2024-Update
GRMZM2G047732 No alias Ribosomal protein S27a / Ubiquitin family protein 0.02 Orthogroups_2024-Update
Glyma.06G133600 No alias Ubiquitin supergroup;Ribosomal protein L40e 0.04 Orthogroups_2024-Update
Glyma.10G051100 No alias ubiquitin 4 0.03 Orthogroups_2024-Update
Glyma.19G195500 No alias Ubiquitin supergroup;Ribosomal protein L40e 0.01 Orthogroups_2024-Update
HORVU1Hr1G023660.1 No alias component *(eS31) of small ribosomal-subunit (SSU) proteome 0.01 Orthogroups_2024-Update
HORVU4Hr1G065100.3 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Kfl00345_0130 kfl00345_0130_v1.... (at3g52590 : 254.0) Ubiquitin extension protein;... 0.07 Orthogroups_2024-Update
LOC_Os05g38310 No alias ubiquitin family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10435699g0020 No alias (at2g47110 : 231.0) polyubiquitin gene; ubiquitin 6... 0.01 Orthogroups_2024-Update
Potri.001G025300 No alias ubiquitin 6 0.01 Orthogroups_2024-Update
Potri.004G194000 No alias ubiquitin extension protein 1 0.01 Orthogroups_2024-Update
Potri.012G024300 No alias Ubiquitin supergroup;Ribosomal protein L40e 0.01 Orthogroups_2024-Update
Pp1s46_189V6 No alias polyubiquitin 0.02 Orthogroups_2024-Update
Pp1s56_52V6 No alias ubiquitin extension protein 0.02 Orthogroups_2024-Update
Seita.2G207500.1 No alias RUB ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Sobic.001G444800.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Sobic.003G152600.1 No alias component *(eS31) of small ribosomal-subunit (SSU) proteome 0.01 Orthogroups_2024-Update
Sobic.009G054800.1 No alias component *(eS31) of small ribosomal-subunit (SSU) proteome 0.01 Orthogroups_2024-Update
Solyc01g056940 No alias Ubiquitin 0.01 Orthogroups_2024-Update
Solyc01g096290 No alias ubiquitin-ribosomal fusion protein 0.01 Orthogroups_2024-Update
Solyc08g083120 No alias ubiquitin-ribosomal fusion protein 0.01 Orthogroups_2024-Update
Solyc12g099030 No alias Ubiquitin, putative (AHRD V3.3 *** B9RN74_RICCO) 0.02 Orthogroups_2024-Update
Sopen01g029970 No alias Ubiquitin family 0.02 Orthogroups_2024-Update
Sopen01g040060 No alias Ubiquitin family 0.03 Orthogroups_2024-Update
Sopen08g004410 No alias Ubiquitin family 0.02 Orthogroups_2024-Update
evm.model.contig_2055.11 No alias (at3g52590 : 241.0) Ubiquitin extension protein;... 0.03 Orthogroups_2024-Update
evm.model.contig_3445.1 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 78 149
IPR000626 Ubiquitin_dom 3 73
No external refs found!