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  5. Mp8g16460.1

Mp8g16460.1


Description : TAC16 cofactor of plastid-encoded RNA polymerase


Gene families : OG_42_0008396 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp8g16460.1
Cluster HCAA Clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
At3g46780 No alias Protein plastid transcriptionally active 16,... 0.03 Orthogroups_2024-Update
Brara.A02435.1 No alias cofactor of plastid-encoded RNA polymerase *(TAC16) 0.02 Orthogroups_2024-Update
Kfl00302_0070 kfl00302_0070_v1.1 (at3g46780 : 160.0) plastid transcriptionally active 16... 0.02 Orthogroups_2024-Update
MA_806g0020 No alias (at3g46780 : 241.0) plastid transcriptionally active 16... 0.02 Orthogroups_2024-Update
Sobic.009G091800.2 No alias cofactor of plastid-encoded RNA polymerase *(TAC16) 0.03 Orthogroups_2024-Update
Sobic.009G091850.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc06g005710 No alias Protein plastid transcriptionally active 16,... 0.02 Orthogroups_2024-Update
Sopen06g001690 No alias NADH(P)-binding 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
MF GO:0098809 nitrite reductase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 195 405
No external refs found!