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  5. Mp8g17910.1

Mp8g17910.1


Description : histone demethylase (KDM5). transcription factor (JUMONJI)


Gene families : OG_42_0007370 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007370_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp8g17910.1
Cluster HCAA Clusters: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Bradi1g29247 No alias transcription factor jumonji (jmjC) domain-containing protein 0.02 Orthogroups_2024-Update
Cre12.g514250 No alias JUMONJI 14 0.02 Orthogroups_2024-Update
Glyma.11G023700 No alias transcription factor jumonji (jmjC) domain-containing protein 0.02 Orthogroups_2024-Update
Potri.003G126600 No alias transcription factor jumonji (jmjC) domain-containing protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004198 Znf_C5HC2 739 790
IPR013637 Lys_sp_deMease-like_dom 961 1138
IPR013637 Lys_sp_deMease-like_dom 1372 1561
IPR013637 Lys_sp_deMease-like_dom 850 1074
IPR013637 Lys_sp_deMease-like_dom 1135 1326
IPR003347 JmjC_dom 530 646
IPR019787 Znf_PHD-finger 359 405
IPR019787 Znf_PHD-finger 1867 1928
IPR003349 JmjN 46 79
IPR001606 ARID_dom 117 212
No external refs found!