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  5. At5g22250

At5g22250


Description : Probable CCR4-associated factor 1 homolog 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMS6]


Gene families : OG_42_0003625 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003625_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g22250
Cluster HCCA clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
A4A49_02001 No alias putative ccr4-associated factor 1-like 11 0.05 Orthogroups_2024-Update
A4A49_25692 No alias putative ccr4-associated factor 1-like 11 0.05 Orthogroups_2024-Update
Brara.J01482.1 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.03 Orthogroups_2024-Update
Glyma.12G187400 No alias Polynucleotidyl transferase, ribonuclease H-like... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
MF GO:0008200 ion channel inhibitor activity IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016247 channel regulator activity IEP Predicted GO
MF GO:0016248 channel inhibitor activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
MF GO:0098599 palmitoyl hydrolase activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
MF GO:0099106 ion channel regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006941 RNase_CAF1 18 143
No external refs found!