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  5. At5g23450

At5g23450


Description : Long-chain base (LCB) kinase 1 [Source:UniProtKB/TrEMBL;Acc:B3H501]


Gene families : OG_42_0002783 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002783_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g23450
Cluster HCCA clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Brara.F02587.1 No alias sphingoid long-chain base kinase *(LCBK1) & EC_2.7... 0.03 Orthogroups_2024-Update
Kfl00002_0150 kfl00002_0150_v1.1 (at5g23450 : 218.0) Encodes a sphingosine kinase that... 0.01 Orthogroups_2024-Update
LOC_Os04g45800 No alias diacylglycerol kinase, putative, expressed 0.02 Orthogroups_2024-Update
Sobic.001G194200.1 No alias sphingoid long-chain base kinase *(LCBK1) & EC_2.7... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016301 kinase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006665 sphingolipid metabolic process IEP Predicted GO
BP GO:0006672 ceramide metabolic process IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0006879 cellular iron ion homeostasis IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0048580 regulation of post-embryonic development IEP Predicted GO
BP GO:0048582 positive regulation of post-embryonic development IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050793 regulation of developmental process IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0051094 positive regulation of developmental process IEP Predicted GO
BP GO:0051239 regulation of multicellular organismal process IEP Predicted GO
BP GO:0051240 positive regulation of multicellular organismal process IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055072 iron ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
BP GO:2000026 regulation of multicellular organismal development IEP Predicted GO
BP GO:2000038 regulation of stomatal complex development IEP Predicted GO
BP GO:2000123 positive regulation of stomatal complex development IEP Predicted GO
InterPro domains Description Start Stop
IPR001206 Diacylglycerol_kinase_cat_dom 249 379
No external refs found!