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  5. Solyc03g115450

Solyc03g115450


Description : LOW QUALITY:Zinc finger protein 1 (AHRD V3.3 *** A0A151SLY5_CAJCA)


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g115450
Cluster HCCA clusters: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
A4A49_15164 No alias zinc finger protein zat5 0.05 Orthogroups_2024-Update
Bradi1g14750 No alias salt tolerance zinc finger 0.04 Orthogroups_2024-Update
Brara.A03482.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Brara.C03744.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Brara.E03015.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G140033 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.13G321900 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.14G088300 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
Glyma.15G040700 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G058720.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
LOC_Os11g47620 No alias ZOS11-09 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
MA_10428436g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00052819-RA No alias (at2g45120 : 101.0) C2H2-like zinc finger protein;... 0.03 Orthogroups_2024-Update
PSME_00056418-RA No alias (at1g02040 : 111.0) C2H2-type zinc finger family... 0.02 Orthogroups_2024-Update
PSME_00056793-RA No alias (at1g02040 : 87.8) C2H2-type zinc finger family protein;... 0.03 Orthogroups_2024-Update
PSME_00056858-RA No alias (at5g56200 : 86.7) C2H2 type zinc finger transcription... 0.02 Orthogroups_2024-Update
Potri.001G295500 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
Potri.004G118100 No alias C2H2-like zinc finger protein 0.02 Orthogroups_2024-Update
Seita.1G372800.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!