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  5. At5g23960

At5g23960


Description : Alpha-humulene/(-)-(E)-beta-caryophyllene synthase [Source:UniProtKB/Swiss-Prot;Acc:Q84UU4]


Gene families : OG_42_0000137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g23960
Cluster HCCA clusters: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
At1g66020 No alias Terpenoid synthase 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E3] 0.05 Orthogroups_2024-Update
At1g70080 No alias Dolabella-3,7-dien-18-ol synthase TPS06... 0.03 Orthogroups_2024-Update
At4g20210 No alias Terpenoid synthase 8 [Source:UniProtKB/Swiss-Prot;Acc:O65435] 0.03 Orthogroups_2024-Update
Brara.A01099.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Brara.K00307.1 No alias EC_4.2 carbon-oxygen lyase &... 0.05 Orthogroups_2024-Update
Brara.K00915.1 No alias EC_4.2 carbon-oxygen lyase 0.04 Orthogroups_2024-Update
Brara.K01719.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
GRMZM2G084496 No alias terpene synthase 21 0.02 Orthogroups_2024-Update
Glyma.12G138100 No alias terpene synthase 21 0.06 Orthogroups_2024-Update
LOC_Os03g22634 No alias terpene synthase, putative, expressed 0.04 Orthogroups_2024-Update
Potri.015G085500 No alias terpene synthase 21 0.03 Orthogroups_2024-Update
Seita.6G066400.1 No alias EC_4.2 carbon-oxygen lyase &... 0.04 Orthogroups_2024-Update
Seita.8G155600.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Sobic.007G133900.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Solyc01g101210 No alias viridiflorene synthase 0.03 Orthogroups_2024-Update
Solyc06g059910 No alias No description available 0.03 Orthogroups_2024-Update
Solyc06g059920 No alias No description available 0.03 Orthogroups_2024-Update
Solyc07g051940 No alias Sesquiterpene synthase (AHRD V3.3 *** G8H5N2_SOLHA) 0.03 Orthogroups_2024-Update
Solyc07g052120 No alias Sesquiterpene synthase (AHRD V3.3 *-* G8H5N2_SOLHA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
MF GO:0010333 terpene synthase activity IEA InterProScan predictions
MF GO:0016829 lyase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 224 491
IPR001906 Terpene_synth_N 24 193
No external refs found!