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  5. At5g24560

At5g24560


Description : phloem protein 2-B12 [Source:TAIR;Acc:AT5G24560]


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g24560
Cluster HCCA clusters: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
Brara.F03422.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F03424.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.K00246.1 No alias Unknown function 0.05 Orthogroups_2024-Update
MA_22084g0010 No alias (at2g02240 : 194.0) maternal effect embryo arrest 66... 0.04 Orthogroups_2024-Update
PSME_00043920-RA No alias (at1g09155 : 152.0) phloem protein 2-B15 (PP2-B15);... 0.04 Orthogroups_2024-Update
PSME_00050415-RA No alias (at1g80110 : 126.0) phloem protein 2-B11 (PP2-B11);... 0.03 Orthogroups_2024-Update
Potri.005G022100 No alias F-box family protein 0.03 Orthogroups_2024-Update
Potri.006G266900 No alias F-box family protein 0.03 Orthogroups_2024-Update
Potri.015G120300 No alias phloem protein 2-B12 0.03 Orthogroups_2024-Update
Sobic.004G340632.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G341000.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g100000 No alias F-box protein (AHRD V3.3 *** W9RMP6_9ROSA) 0.03 Orthogroups_2024-Update
Solyc11g006740 No alias F-box protein PP2 (AHRD V3.3 *** A0A059PC27_CICAR) 0.03 Orthogroups_2024-Update
Solyc12g098190 No alias F-box family protein (AHRD V3.3 *** AT2G02240.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 143 191
IPR025886 PP2-like 93 143
IPR001810 F-box_dom 1 46
No external refs found!