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  5. At5g24870

At5g24870


Description : At5g24870 [Source:UniProtKB/TrEMBL;Acc:Q8L775]


Gene families : OG_42_0000181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g24870
Cluster HCCA clusters: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
A4A49_23702 No alias putative e3 ubiquitin-protein ligase hip1 0.06 Orthogroups_2024-Update
Brara.C03555.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.F00132.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Brara.G02303.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Glyma.04G075400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G241900 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.19G180000 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os05g47670 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
Sobic.006G205100.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Solyc03g118840 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G73760.1) 0.04 Orthogroups_2024-Update
Solyc12g096420 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT5G10650.2) 0.03 Orthogroups_2024-Update
Sopen12g032260 No alias Ring finger domain 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 467 509
No external refs found!