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  5. At5g27240

At5g27240


Description : DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4K2V2]


Gene families : OG_42_0000250 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000250_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g27240
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Bradi1g27400 No alias DNAJ heat shock N-terminal domain-containing protein 0.04 Orthogroups_2024-Update
Bradi1g34150 No alias DNAJ heat shock N-terminal domain-containing protein 0.02 Orthogroups_2024-Update
Bradi1g76707 No alias DNAJ heat shock N-terminal domain-containing protein 0.04 Orthogroups_2024-Update
Glyma.13G214300 No alias DNAJ heat shock N-terminal domain-containing protein 0.05 Orthogroups_2024-Update
Glyma.14G161200 No alias DNAJ heat shock N-terminal domain-containing protein 0.04 Orthogroups_2024-Update
Glyma.15G098900 No alias DNAJ heat shock N-terminal domain-containing protein 0.05 Orthogroups_2024-Update
HORVU3Hr1G051850.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G050080.7 No alias Unknown function 0.03 Orthogroups_2024-Update
Kfl00092_0360 kfl00092_0360_v1.1 (at2g25560 : 98.6) DNAJ heat shock N-terminal... 0.02 Orthogroups_2024-Update
PSME_00056922-RA No alias (at3g06340 : 187.0) DNAJ heat shock N-terminal... 0.04 Orthogroups_2024-Update
Pp1s193_65V6 No alias MNJ8.20; DnaJ protein family [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.5G073300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G155600.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen00g008510 No alias Domain of unknown function (DUF3444) 0.02 Orthogroups_2024-Update
Sopen01g018070 No alias Domain of unknown function (DUF3444) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0005049 nuclear export signal receptor activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005801 cis-Golgi network IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP Predicted GO
BP GO:0009245 lipid A biosynthetic process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
MF GO:0019213 deacetylase activity IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
MF GO:0030623 U5 snRNA binding IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046493 lipid A metabolic process IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
BP GO:1901269 lipooligosaccharide metabolic process IEP Predicted GO
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 66 127
IPR024593 DUF3444 474 669
IPR024593 DUF3444 887 1077
No external refs found!