At5g27530

Description : Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K4C2]

Gene families : OG_42_0000306 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000306_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At5g27530
Cluster	HCCA clusters: Cluster_195

Target	Alias	Description	ECC score	Gene Family Method
Brara.G00978.1	No alias	EC_3.2 glycosylase	0.03	Orthogroups_2024-Update
HORVU1Hr1G079140.6	No alias	EC_3.2 glycosylase	0.03	Orthogroups_2024-Update
LOC_Os05g46510	No alias	polygalacturonase, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00006809-RA	No alias	(at1g23460 : 407.0) Pectin lyase-like superfamily...	0.04	Orthogroups_2024-Update
PSME_00025694-RA	No alias	(at1g80170 : 422.0) Pectin lyase-like superfamily...	0.03	Orthogroups_2024-Update
Sobic.001G045900.1	No alias	polygalacturonase *(QRT2) & EC_3.2 glycosylase	0.02	Orthogroups_2024-Update
Sobic.006G178900.1	No alias	EC_3.2 glycosylase	0.03	Orthogroups_2024-Update
Solyc12g009420	No alias	Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G57510.1)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005811	lipid droplet	IEP	Predicted GO
BP	GO:0005984	disaccharide metabolic process	IEP	Predicted GO
BP	GO:0005985	sucrose metabolic process	IEP	Predicted GO
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Predicted GO
CC	GO:0012511	monolayer-surrounded lipid storage body	IEP	Predicted GO
MF	GO:0016157	sucrose synthase activity	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	84	398

External Links

No external refs found!