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At5g27870


Description : Putative pectinesterase/pectinesterase inhibitor 28 [Source:UniProtKB/Swiss-Prot;Acc:Q3E8Z8]


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g27870
Cluster HCCA clusters: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
101118 No alias pectin methylesterase PCR fragment F 0.03 Orthogroups_2024-Update
114014 No alias pectin methylesterase PCR fragment F 0.03 Orthogroups_2024-Update
At4g02320 No alias Pectinesterase [Source:UniProtKB/TrEMBL;Acc:A0A178V0A5] 0.04 Orthogroups_2024-Update
At4g33220 No alias Probable pectinesterase/pectinesterase inhibitor 44... 0.04 Orthogroups_2024-Update
Brara.K01158.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Glyma.03G234100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
MA_10434624g0020 No alias (at1g53830 : 387.0) encodes a pectin methylesterase;... 0.03 Orthogroups_2024-Update
MA_9367g0020 No alias (o04886|pme1_citsi : 511.0) Pectinesterase-1 precursor... 0.03 Orthogroups_2024-Update
PSME_00022513-RA No alias (p83948|pme3_citsi : 479.0) Pectinesterase-3 precursor... 0.03 Orthogroups_2024-Update
PSME_00043969-RA No alias (at1g53830 : 497.0) encodes a pectin methylesterase;... 0.04 Orthogroups_2024-Update
PSME_00056054-RA No alias (at4g02330 : 471.0) ATPMEPCRB; FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
Potri.T148300 No alias pectin methylesterase 3 0.03 Orthogroups_2024-Update
Sobic.002G251600.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.04 Orthogroups_2024-Update
Sopen03g023110 No alias Pectinesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA InterProScan predictions
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 56 204
IPR000070 Pectinesterase_cat 252 548
No external refs found!