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At5g28780


Description : ATP-dependent DNA helicase [Source:UniProtKB/TrEMBL;Acc:F4KA12]


Gene families : OG_42_0000057 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g28780
Cluster HCCA clusters: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Bradi4g18358 No alias PIF1 helicase 0.02 Orthogroups_2024-Update
HORVU7Hr1G085360.2 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os02g47340 No alias retrotransposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g23030 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEA InterProScan predictions
MF GO:0003678 DNA helicase activity IEA InterProScan predictions
BP GO:0006281 DNA repair IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
InterPro domains Description Start Stop
IPR010285 DNA_helicase_pif1-like 54 215
No external refs found!