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  5. Solyc03g115940

Solyc03g115940


Description : Dof zinc finger protein (AHRD V3.3 *** C4B6D7_IPOBA)


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g115940
Cluster HCCA clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
A4A49_23576 No alias dof zinc finger protein dof5.4 0.03 Orthogroups_2024-Update
A4A49_34579 No alias dof zinc finger protein pbf 0.05 Orthogroups_2024-Update
AC155434.2_FG006 No alias cycling DOF factor 3 0.02 Orthogroups_2024-Update
At1g07640 No alias Dof-type zinc finger DNA-binding family protein... 0.03 Orthogroups_2024-Update
At3g47500 No alias Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3] 0.02 Orthogroups_2024-Update
Bradi3g25670 No alias cycling DOF factor 1 0.04 Orthogroups_2024-Update
Bradi3g56380 No alias OBF binding protein 4 0.02 Orthogroups_2024-Update
Brara.A01411.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.F01753.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Brara.F02115.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Brara.G00810.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
GRMZM2G064655 No alias TARGET OF MONOPTEROS 6 0.03 Orthogroups_2024-Update
GRMZM2G134545 No alias TARGET OF MONOPTEROS 6 0.03 Orthogroups_2024-Update
GRMZM2G142718 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
GRMZM2G162749 No alias cycling DOF factor 1 0.03 Orthogroups_2024-Update
GRMZM2G394941 No alias OBF binding protein 4 0.05 Orthogroups_2024-Update
GRMZM2G589696 No alias Dof-type zinc finger DNA-binding family protein 0.05 Orthogroups_2024-Update
Glyma.04G168300 No alias cycling DOF factor 3 0.05 Orthogroups_2024-Update
Glyma.05G025900 No alias cycling DOF factor 3 0.06 Orthogroups_2024-Update
Glyma.06G124300 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Glyma.06G194800 No alias cycling DOF factor 3 0.08 Orthogroups_2024-Update
Glyma.07G229600 No alias cycling DOF factor 2 0.04 Orthogroups_2024-Update
Glyma.13G062500 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Glyma.17G101000 No alias cycling DOF factor 3 0.06 Orthogroups_2024-Update
Glyma.18G260500 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
HORVU1Hr1G074140.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
HORVU3Hr1G072970.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
HORVU4Hr1G074990.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
LOC_Os01g15900 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os03g07360 No alias expressed protein 0.06 Orthogroups_2024-Update
LOC_Os07g48570 No alias expressed protein 0.06 Orthogroups_2024-Update
MA_175298g0010 No alias (at5g39660 : 214.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
Mp2g20790.1 No alias transcription factor (DOF) 0.03 Orthogroups_2024-Update
PSME_00004776-RA No alias (at5g60850 : 127.0) Encodes a zinc finger protein.; OBF... 0.03 Orthogroups_2024-Update
PSME_00040668-RA No alias (at5g02460 : 137.0) Dof-type zinc finger DNA-binding... 0.03 Orthogroups_2024-Update
Potri.004G046600 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Potri.011G047500 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
Potri.014G100900 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Pp1s177_76V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Seita.2G436800.1 No alias transcription factor *(DOF) 0.06 Orthogroups_2024-Update
Seita.9G525000.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Sobic.001G034300.3 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Sobic.002G421900.1 No alias transcription factor *(DOF) 0.07 Orthogroups_2024-Update
Sopen02g015430 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen03g034940 No alias Dof domain, zinc finger 0.09 Orthogroups_2024-Update
Sopen06g027050 No alias Dof domain, zinc finger 0.15 Orthogroups_2024-Update
Sopen10g005150 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 159 215
No external refs found!