Solyc03g115980

Description : Geranylgeranyl reductase (AHRD V3.3 *** A0A097P6G1_SOLHA)

Gene families : OG_42_0003500 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003500_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc03g115980
Cluster	HCCA clusters: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
A4A49_16817	No alias	geranylgeranyl diphosphate reductase, chloroplastic	0.05	Orthogroups_2024-Update
At1g74470	No alias	Geranylgeranyl diphosphate reductase, chloroplastic...	0.04	Orthogroups_2024-Update
Bradi3g59430	No alias	Pyridine nucleotide-disulphide oxidoreductase family protein	0.07	Orthogroups_2024-Update
Brara.B02126.1	No alias	geranylgeranyl reductase *(CHLP)	0.04	Orthogroups_2024-Update
Brara.G03173.1	No alias	geranylgeranyl reductase *(CHLP)	0.04	Orthogroups_2024-Update
Cre01.g050950	No alias	Pyridine nucleotide-disulphide oxidoreductase family protein	0.01	Orthogroups_2024-Update
Glyma.05G026200	No alias	Pyridine nucleotide-disulphide oxidoreductase family protein	0.04	Orthogroups_2024-Update
Glyma.17G100700	No alias	Pyridine nucleotide-disulphide oxidoreductase family protein	0.04	Orthogroups_2024-Update
LOC_Os02g51080	No alias	FAD binding domain containing protein, expressed	0.06	Orthogroups_2024-Update
MA_189742g0010	No alias	(at1g74470 : 705.0) Encodes for a multifunctional...	0.02	Orthogroups_2024-Update
Mp4g20130.1	No alias	geranylgeranyl reductase (ChlP)	0.03	Orthogroups_2024-Update
PSME_00046546-RA	No alias	(at1g74470 : 706.0) Encodes for a multifunctional...	0.03	Orthogroups_2024-Update
Potri.012G068800	No alias	Pyridine nucleotide-disulphide oxidoreductase family protein	0.04	Orthogroups_2024-Update
Pp1s100_107V6	No alias	geranylgeranyl reductase	0.02	Orthogroups_2024-Update
Pp1s425_20V6	No alias	geranylgeranyl reductase	0.03	Orthogroups_2024-Update
Seita.1G318400.1	No alias	geranylgeranyl reductase *(CHLP)	0.09	Orthogroups_2024-Update
Sobic.004G238500.1	No alias	geranylgeranyl reductase *(CHLP)	0.06	Orthogroups_2024-Update
Sopen03g034970	No alias	FAD binding domain	0.15	Orthogroups_2024-Update
evm.model.contig_2502.19	No alias	(at1g74470 : 564.0) Encodes for a multifunctional...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	InterProScan predictions
MF	GO:0050662	coenzyme binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005102	signaling receptor binding	IEP	Predicted GO
BP	GO:0006721	terpenoid metabolic process	IEP	Predicted GO
MF	GO:0008083	growth factor activity	IEP	Predicted GO
BP	GO:0008283	cell proliferation	IEP	Predicted GO
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	Predicted GO
CC	GO:0009521	photosystem	IEP	Predicted GO
CC	GO:0009522	photosystem I	IEP	Predicted GO
CC	GO:0009523	photosystem II	IEP	Predicted GO
CC	GO:0009538	photosystem I reaction center	IEP	Predicted GO
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Predicted GO
BP	GO:0015979	photosynthesis	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
BP	GO:0016114	terpenoid biosynthetic process	IEP	Predicted GO
BP	GO:0016310	phosphorylation	IEP	Predicted GO
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Predicted GO
MF	GO:0016744	transferase activity, transferring aldehyde or ketonic groups	IEP	Predicted GO
MF	GO:0016851	magnesium chelatase activity	IEP	Predicted GO
MF	GO:0030145	manganese ion binding	IEP	Predicted GO
MF	GO:0030545	receptor regulator activity	IEP	Predicted GO
CC	GO:0044436	thylakoid part	IEP	Predicted GO
BP	GO:0046834	lipid phosphorylation	IEP	Predicted GO
BP	GO:0046854	phosphatidylinositol phosphorylation	IEP	Predicted GO
MF	GO:0048018	receptor ligand activity	IEP	Predicted GO
MF	GO:0051002	ligase activity, forming nitrogen-metal bonds	IEP	Predicted GO
MF	GO:0051003	ligase activity, forming nitrogen-metal bonds, forming coordination complexes	IEP	Predicted GO
MF	GO:0051087	chaperone binding	IEP	Predicted GO
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Predicted GO
MF	GO:0071949	FAD binding	IEP	Predicted GO
CC	GO:0098796	membrane protein complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002218	MnmG-rel	55	89

External Links

No external refs found!

Solyc03g115980

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation