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  5. At5g35550

At5g35550


Description : Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT5G35550]


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g35550
Cluster HCCA clusters: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
A4A49_01152 No alias transcription factor myb36 0.03 Orthogroups_2024-Update
A4A49_08715 No alias myb-related protein pp2 0.03 Orthogroups_2024-Update
A4A49_12817 No alias myb-related protein pp2 0.03 Orthogroups_2024-Update
A4A49_16262 No alias transcription factor myb39 0.03 Orthogroups_2024-Update
A4A49_20218 No alias transcription factor myb39 0.03 Orthogroups_2024-Update
A4A49_20993 No alias transcription factor myb39 0.03 Orthogroups_2024-Update
A4A49_26801 No alias transcription factor myb3 0.03 Orthogroups_2024-Update
A4A49_39488 No alias myb-related protein pp2 0.05 Orthogroups_2024-Update
At1g18570 No alias Transcription factor MYB51... 0.03 Orthogroups_2024-Update
At1g22640 No alias MYB3 [Source:UniProtKB/TrEMBL;Acc:A0A178WFN1] 0.03 Orthogroups_2024-Update
At1g25340 No alias myb domain protein 116 [Source:TAIR;Acc:AT1G25340] 0.04 Orthogroups_2024-Update
At2g31180 No alias Transcription factor MYB14... 0.03 Orthogroups_2024-Update
At2g47190 No alias ATMYB2 [Source:UniProtKB/TrEMBL;Acc:Q39028] 0.04 Orthogroups_2024-Update
At3g13890 No alias Transcription factor MYB26... 0.03 Orthogroups_2024-Update
At3g28470 No alias Transcription factor MYB35... 0.03 Orthogroups_2024-Update
At3g48920 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SMT1] 0.03 Orthogroups_2024-Update
At3g62610 No alias Transcription factor MYB11... 0.04 Orthogroups_2024-Update
At4g26930 No alias Transcription factor MYB97... 0.04 Orthogroups_2024-Update
At5g10280 No alias Transcription factor MYB92... 0.04 Orthogroups_2024-Update
Brara.A00330.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Brara.A01549.1 No alias MYB class-R2R3 subgroup-16 transcription factor &... 0.03 Orthogroups_2024-Update
Brara.B01071.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.B01349.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.03 Orthogroups_2024-Update
Brara.B01779.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
Brara.B03395.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Brara.B03816.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Brara.C02944.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
Brara.C04622.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.D01054.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.05 Orthogroups_2024-Update
Brara.E03665.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.05 Orthogroups_2024-Update
Brara.F02919.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.G03210.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.I00102.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.04 Orthogroups_2024-Update
Brara.I00299.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.05 Orthogroups_2024-Update
Brara.I00496.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Brara.I01264.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J00431.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Brara.K01188.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G013581 No alias myb domain protein 48 0.02 Orthogroups_2024-Update
GRMZM2G050305 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
GRMZM2G064744 No alias myb domain protein 86 0.02 Orthogroups_2024-Update
GRMZM2G126566 No alias myb domain protein 20 0.03 Orthogroups_2024-Update
Glyma.03G013300 No alias myb domain protein 17 0.04 Orthogroups_2024-Update
Glyma.05G211200 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Glyma.10G014600 No alias myb domain protein 12 0.03 Orthogroups_2024-Update
Glyma.10G132200 No alias myb domain protein 79 0.03 Orthogroups_2024-Update
Glyma.10G142200 No alias myb domain protein 61 0.04 Orthogroups_2024-Update
Glyma.11G009400 No alias myb domain protein 107 0.03 Orthogroups_2024-Update
Glyma.12G237500 No alias myb domain protein 83 0.02 Orthogroups_2024-Update
Glyma.13G145800 No alias myb domain protein 27 0.02 Orthogroups_2024-Update
Glyma.13G247200 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Glyma.14G091500 No alias myb domain protein 68 0.03 Orthogroups_2024-Update
Glyma.15G066800 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Glyma.16G007100 No alias myb domain protein 6 0.03 Orthogroups_2024-Update
Glyma.16G007200 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Glyma.17G065800 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Glyma.18G261400 No alias myb domain protein 16 0.03 Orthogroups_2024-Update
Glyma.20G184100 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
HORVU4Hr1G054420.3 No alias MYB class-R2R3 subgroup-7 transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G021750.2 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g19970 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g36460 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g38740 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g43680 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g50770 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g48010 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g35660 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g37970 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_19163g0010 No alias (p20026|myb1_horvu : 256.0) Myb-related protein Hv1 -... 0.03 Orthogroups_2024-Update
MA_21440g0010 No alias "(at2g47460 : 187.0) ""MYB12 belongs to subgroup 7 of... 0.03 Orthogroups_2024-Update
MA_33964g0010 No alias (at5g16600 : 262.0) Encodes a putative transcription... 0.05 Orthogroups_2024-Update
MA_8356281g0010 No alias (at3g13540 : 224.0) Encodes a member of the MYB family... 0.03 Orthogroups_2024-Update
PSME_00009359-RA No alias (at1g22640 : 174.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
PSME_00014640-RA No alias (at3g27810 : 179.0) Encodes a member of the R2R3-MYB... 0.03 Orthogroups_2024-Update
PSME_00028766-RA No alias (at3g01140 : 277.0) Encodes a MIXTA-like MYB gene NOECK... 0.04 Orthogroups_2024-Update
PSME_00036696-RA No alias (at5g16770 : 208.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00049306-RA No alias (at5g15310 : 258.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00050915-RA No alias (at1g74650 : 283.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00051072-RA No alias (at4g34990 : 160.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00051224-RA No alias (at5g15310 : 212.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
Potri.003G079100 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
Potri.003G114100 No alias myb domain protein 42 0.03 Orthogroups_2024-Update
Potri.003G155700 No alias myb domain protein 67 0.03 Orthogroups_2024-Update
Potri.006G170800 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Potri.006G221200 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
Potri.008G122100 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
Potri.008G166700 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Potri.008G173400 No alias myb domain protein 79 0.03 Orthogroups_2024-Update
Potri.009G007100 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Potri.009G053900 No alias myb domain protein 46 0.03 Orthogroups_2024-Update
Potri.012G127700 No alias myb domain protein 42 0.03 Orthogroups_2024-Update
Potri.015G067700 No alias Duplicated homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Pp1s277_14V6 No alias myb55 (myb domain protein 55) dna binding transcription factor 0.03 Orthogroups_2024-Update
Pp1s420_4V6 No alias myb-related transcription factor 0.02 Orthogroups_2024-Update
Pp1s61_196V6 No alias myb transcription factor myb92 0.02 Orthogroups_2024-Update
Seita.1G281500.1 No alias MYB class-R2R3 subgroup-3 transcription factor 0.02 Orthogroups_2024-Update
Seita.2G351400.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.02 Orthogroups_2024-Update
Seita.3G154700.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Seita.5G274200.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.04 Orthogroups_2024-Update
Seita.7G179600.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.02 Orthogroups_2024-Update
Seita.7G284800.1 No alias MYB class-R2R3 subgroup-4 transcription factor & MYB... 0.04 Orthogroups_2024-Update
Sobic.001G183100.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.04 Orthogroups_2024-Update
Sobic.003G280000.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G132600.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G148100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Solyc05g008250 No alias R2R3MYB transcription factor 76 0.03 Orthogroups_2024-Update
Sopen03g031480 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen06g027120 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen08g019610 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen10g025190 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 16 63
IPR001005 SANT/Myb 69 113
No external refs found!