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At5g37560


Description : RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F4K784]


Gene families : OG_42_0000330 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g37560
Cluster HCCA clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
Brara.G00645.1 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002156 RNaseH_domain 59 147
IPR002867 IBR_dom 249 314
IPR002867 IBR_dom 329 383
No external refs found!