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At5g38730


Description : Pentatricopeptide repeat-containing protein At5g38730 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKR3]


Gene families : OG_42_0009590 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009590_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g38730
Cluster HCCA clusters: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
Bradi3g60300 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 303 334
IPR002885 Pentatricopeptide_repeat 268 299
IPR002885 Pentatricopeptide_repeat 398 454
IPR002885 Pentatricopeptide_repeat 518 544
IPR002885 Pentatricopeptide_repeat 171 199
IPR002885 Pentatricopeptide_repeat 485 513
IPR002885 Pentatricopeptide_repeat 202 250
IPR002885 Pentatricopeptide_repeat 340 389
No external refs found!