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  5. At5g39270

At5g39270


Description : Expansin-A22 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL80]


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g39270
Cluster HCCA clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
102623 No alias expansin A15 0.03 Orthogroups_2024-Update
409954 No alias expansin A8 0.03 Orthogroups_2024-Update
A4A49_21927 No alias expansin-a7 0.04 Orthogroups_2024-Update
At1g62980 No alias Expansin-A18 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ07] 0.03 Orthogroups_2024-Update
At5g39280 No alias Expansin-A23 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL79] 0.04 Orthogroups_2024-Update
Brara.F03390.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Brara.I03802.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Brara.K00806.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
GRMZM2G105844 No alias expansin A1 0.03 Orthogroups_2024-Update
GRMZM2G339122 No alias expansin A1 0.03 Orthogroups_2024-Update
Glyma.15G037700 No alias expansin A4 0.03 Orthogroups_2024-Update
LOC_Os01g60770 No alias expansin precursor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os02g51040 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g60720 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_100868g0010 No alias (at2g40610 : 292.0) member of Alpha-Expansin Gene... 0.04 Orthogroups_2024-Update
MA_10434805g0030 No alias (at2g40610 : 365.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
MA_40671g0010 No alias (q40636|expa2_orysa : 346.0) Expansin-A2 precursor... 0.03 Orthogroups_2024-Update
MA_86877g0010 No alias (at1g69530 : 387.0) Member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00037641-RA No alias (q852a1|expa7_orysa : 440.0) Expansin-A7 precursor... 0.02 Orthogroups_2024-Update
Potri.006G086100 No alias Barwin-like endoglucanases superfamily protein 0.03 Orthogroups_2024-Update
Sobic.010G006200.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Solyc03g031840 No alias expansin precursor 3 0.03 Orthogroups_2024-Update
Solyc09g010860 No alias expansin precursor 4 0.04 Orthogroups_2024-Update
Solyc12g089380 No alias expansin 8 0.03 Orthogroups_2024-Update
Sopen02g032810 No alias Pollen allergen 0.02 Orthogroups_2024-Update
Sopen06g032650 No alias Pollen allergen 0.02 Orthogroups_2024-Update
Sopen08g003710 No alias Rare lipoprotein A (RlpA)-like double-psi beta-barrel 0.03 Orthogroups_2024-Update
Sopen09g010480 No alias Pollen allergen 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 93 176
IPR007117 Expansin_CBD 187 264
No external refs found!